Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GDF1P27539 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 MIR718-201ENST00000390190 70 ntBASIC18.05■□□□□ 0.48
GDF1P27539 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.05■□□□□ 0.48
GDF1P27539 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.05■□□□□ 0.48
GDF1P27539 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GDF1P27539 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GDF1P27539 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.05■□□□□ 0.48
GDF1P27539 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.05■□□□□ 0.48
GDF1P27539 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.05■□□□□ 0.48
GDF1P27539 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.04■□□□□ 0.48
GDF1P27539 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF1P27539 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GDF1P27539 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF1P27539 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF1P27539 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.04■□□□□ 0.48
GDF1P27539 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GDF1P27539 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF1P27539 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
GDF1P27539 AC020907.5-201ENST00000624372 1936 ntBASIC18.04■□□□□ 0.48
GDF1P27539 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF1P27539 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF1P27539 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF1P27539 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF1P27539 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF1P27539 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF1P27539 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.03■□□□□ 0.48
GDF1P27539 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF1P27539 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GDF1P27539 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.02■□□□□ 0.48
GDF1P27539 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.02■□□□□ 0.48
GDF1P27539 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.02■□□□□ 0.48
GDF1P27539 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.02■□□□□ 0.48
GDF1P27539 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.02■□□□□ 0.48
GDF1P27539 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.02■□□□□ 0.48
GDF1P27539 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.02■□□□□ 0.48
GDF1P27539 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.02■□□□□ 0.48
GDF1P27539 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.02■□□□□ 0.48
GDF1P27539 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF1P27539 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.02■□□□□ 0.48
GDF1P27539 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
GDF1P27539 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
GDF1P27539 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.02■□□□□ 0.47
GDF1P27539 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 NBPF21P-201ENST00000425093 1451 ntBASIC18.01■□□□□ 0.47
GDF1P27539 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 AC073314.1-201ENST00000568729 2216 ntBASIC18.01■□□□□ 0.47
GDF1P27539 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GDF1P27539 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.01■□□□□ 0.47
GDF1P27539 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GDF1P27539 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GDF1P27539 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.01■□□□□ 0.47
GDF1P27539 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.01■□□□□ 0.47
GDF1P27539 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDF1P27539 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms