Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL1P22362 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CCL1P22362 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL1P22362 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCL1P22362 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CCL1P22362 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL1P22362 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CCL1P22362 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL1P22362 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL1P22362 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL1P22362 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL1P22362 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCL1P22362 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCL1P22362 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCL1P22362 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL1P22362 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL1P22362 AC133552.2-202ENST00000575694 574 ntBASIC17.12■□□□□ 0.33
CCL1P22362 AC005181.1-201ENST00000604782 1256 ntBASIC17.12■□□□□ 0.33
CCL1P22362 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL1P22362 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCL1P22362 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL1P22362 Z82202.1-201ENST00000623446 1880 ntBASIC17.12■□□□□ 0.33
CCL1P22362 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL1P22362 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL1P22362 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.11■□□□□ 0.33
CCL1P22362 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 AC022517.1-201ENST00000592429 346 ntBASIC17.11■□□□□ 0.33
CCL1P22362 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL1P22362 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCL1P22362 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL1P22362 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.11■□□□□ 0.33
CCL1P22362 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCL1P22362 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL1P22362 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL1P22362 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.1■□□□□ 0.33
CCL1P22362 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.1■□□□□ 0.33
CCL1P22362 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CCL1P22362 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCL1P22362 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCL1P22362 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCL1P22362 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL1P22362 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL1P22362 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms