Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CCDC172P0C7W6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC172P0C7W6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 KRT8P20-201ENST00000423953 1409 ntBASIC21.46■■□□□ 1.03
CCDC172P0C7W6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 CYP2T3P-201ENST00000601990 817 ntBASIC21.46■■□□□ 1.03
CCDC172P0C7W6 AL031963.3-201ENST00000606441 850 ntBASIC21.46■■□□□ 1.03
CCDC172P0C7W6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC172P0C7W6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 PTBP1P-201ENST00000554374 1601 ntBASIC21.45■■□□□ 1.02
CCDC172P0C7W6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.45■■□□□ 1.02
CCDC172P0C7W6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC172P0C7W6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 HLA-G-202ENST00000376815 851 ntBASIC21.44■■□□□ 1.02
CCDC172P0C7W6 HLA-G-203ENST00000376818 1127 ntBASIC21.44■■□□□ 1.02
CCDC172P0C7W6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.44■■□□□ 1.02
CCDC172P0C7W6 AL589743.5-201ENST00000616611 1050 ntBASIC21.44■■□□□ 1.02
CCDC172P0C7W6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC172P0C7W6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 AL162430.1-201ENST00000480705 870 ntBASIC21.43■■□□□ 1.02
CCDC172P0C7W6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.43■■□□□ 1.02
CCDC172P0C7W6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC172P0C7W6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC172P0C7W6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC172P0C7W6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms