Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN1P07384 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN1P07384 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CAPN1P07384 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.54■□□□□ 0.72
CAPN1P07384 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.54■□□□□ 0.72
CAPN1P07384 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.54■□□□□ 0.72
CAPN1P07384 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.54■□□□□ 0.72
CAPN1P07384 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CAPN1P07384 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN1P07384 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.54■□□□□ 0.72
CAPN1P07384 KRT17P1-201ENST00000399211 1546 ntBASIC19.54■□□□□ 0.72
CAPN1P07384 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CAPN1P07384 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN1P07384 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.54■□□□□ 0.72
CAPN1P07384 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN1P07384 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 AC087633.2-202ENST00000565166 1439 ntBASIC19.53■□□□□ 0.72
CAPN1P07384 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CAPN1P07384 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN1P07384 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN1P07384 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 PGM5P4-201ENST00000421970 445 ntBASIC19.53■□□□□ 0.72
CAPN1P07384 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN1P07384 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.53■□□□□ 0.72
CAPN1P07384 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CAPN1P07384 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN1P07384 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.53■□□□□ 0.72
CAPN1P07384 AL356652.1-201ENST00000615962 565 ntBASIC19.53■□□□□ 0.72
CAPN1P07384 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN1P07384 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN1P07384 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CAPN1P07384 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN1P07384 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.52■□□□□ 0.72
CAPN1P07384 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CAPN1P07384 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CAPN1P07384 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CAPN1P07384 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.52■□□□□ 0.72
CAPN1P07384 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CAPN1P07384 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 CYP21A1P-202ENST00000354927 1481 ntBASIC19.52■□□□□ 0.72
CAPN1P07384 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN1P07384 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN1P07384 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN1P07384 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN1P07384 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN1P07384 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.52■□□□□ 0.71
CAPN1P07384 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.52■□□□□ 0.71
CAPN1P07384 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CAPN1P07384 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.51■□□□□ 0.71
CAPN1P07384 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN1P07384 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.51■□□□□ 0.71
CAPN1P07384 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.51■□□□□ 0.71
CAPN1P07384 CYP2T3P-201ENST00000601990 817 ntBASIC19.51■□□□□ 0.71
CAPN1P07384 ITM2C-210ENST00000620962 501 ntBASIC19.51■□□□□ 0.71
CAPN1P07384 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.51■□□□□ 0.71
CAPN1P07384 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPN1P07384 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CAPN1P07384 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPN1P07384 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPN1P07384 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPN1P07384 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPN1P07384 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPN1P07384 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms