Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF11O60813 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 AC116351.2-201ENST00000606540 1585 ntBASIC20.22■□□□□ 0.83
PRAMEF11O60813 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF11O60813 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PRAMEF11O60813 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF11O60813 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF11O60813 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 AC233263.1-201ENST00000578059 224 ntBASIC20.22■□□□□ 0.83
PRAMEF11O60813 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 AC069544.1-201ENST00000609399 999 ntBASIC20.22■□□□□ 0.83
PRAMEF11O60813 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.22■□□□□ 0.83
PRAMEF11O60813 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF11O60813 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 ABHD17AP1-201ENST00000358206 933 ntBASIC20.21■□□□□ 0.83
PRAMEF11O60813 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.21■□□□□ 0.83
PRAMEF11O60813 AC128676.1-201ENST00000454392 318 ntBASIC20.21■□□□□ 0.83
PRAMEF11O60813 AL121829.2-201ENST00000620908 328 ntBASIC20.21■□□□□ 0.83
PRAMEF11O60813 AL121906.2-201ENST00000621597 723 ntBASIC20.21■□□□□ 0.83
PRAMEF11O60813 AC073648.6-201ENST00000641589 218 ntBASIC20.21■□□□□ 0.83
PRAMEF11O60813 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.21■□□□□ 0.83
PRAMEF11O60813 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PRAMEF11O60813 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.21■□□□□ 0.83
PRAMEF11O60813 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRAMEF11O60813 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 AC018553.1-201ENST00000616682 1458 ntBASIC20.2■□□□□ 0.82
PRAMEF11O60813 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF11O60813 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF11O60813 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF11O60813 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PRAMEF11O60813 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PRAMEF11O60813 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.2■□□□□ 0.82
PRAMEF11O60813 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 ITM2C-210ENST00000620962 501 ntBASIC20.19■□□□□ 0.82
PRAMEF11O60813 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF11O60813 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.19■□□□□ 0.82
PRAMEF11O60813 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 AP001271.2-201ENST00000624018 1556 ntBASIC20.18■□□□□ 0.82
PRAMEF11O60813 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 MTDHP1-201ENST00000605323 784 ntBASIC20.18■□□□□ 0.82
PRAMEF11O60813 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF11O60813 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF11O60813 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms