Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC23.32■■□□□ 1.32
CTNND1O60716 NAPSB-206ENST00000562112 1266 ntBASIC23.32■■□□□ 1.32
CTNND1O60716 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.32■■□□□ 1.32
CTNND1O60716 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CTNND1O60716 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.31■■□□□ 1.32
CTNND1O60716 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.31■■□□□ 1.32
CTNND1O60716 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
CTNND1O60716 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 CYP2D8P-201ENST00000433633 1490 ntBASIC23.31■■□□□ 1.32
CTNND1O60716 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.31■■□□□ 1.32
CTNND1O60716 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 AL390955.1-201ENST00000428694 934 ntBASIC23.31■■□□□ 1.32
CTNND1O60716 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
CTNND1O60716 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.31■■□□□ 1.32
CTNND1O60716 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.31■■□□□ 1.32
CTNND1O60716 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.31■■□□□ 1.32
CTNND1O60716 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.31■■□□□ 1.32
CTNND1O60716 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.31■■□□□ 1.32
CTNND1O60716 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.31■■□□□ 1.32
CTNND1O60716 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CTNND1O60716 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.31■■□□□ 1.32
CTNND1O60716 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CTNND1O60716 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CTNND1O60716 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.3■■□□□ 1.32
CTNND1O60716 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CTNND1O60716 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CTNND1O60716 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CTNND1O60716 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 AC005521.1-201ENST00000393351 872 ntBASIC23.3■■□□□ 1.32
CTNND1O60716 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.3■■□□□ 1.32
CTNND1O60716 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC23.3■■□□□ 1.32
CTNND1O60716 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CTNND1O60716 C1QL1P1-201ENST00000568105 661 ntBASIC23.3■■□□□ 1.32
CTNND1O60716 AC010947.1-201ENST00000623454 693 ntBASIC23.3■■□□□ 1.32
CTNND1O60716 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CTNND1O60716 AL031985.4-201ENST00000642138 673 ntBASIC23.3■■□□□ 1.32
CTNND1O60716 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.3■■□□□ 1.32
CTNND1O60716 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CTNND1O60716 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.29■■□□□ 1.32
CTNND1O60716 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CTNND1O60716 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CTNND1O60716 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.29■■□□□ 1.32
CTNND1O60716 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.29■■□□□ 1.32
CTNND1O60716 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.29■■□□□ 1.32
CTNND1O60716 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.29■■□□□ 1.32
CTNND1O60716 FP700111.2-201ENST00000619190 1892 ntBASIC23.29■■□□□ 1.32
CTNND1O60716 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CTNND1O60716 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CTNND1O60716 KRT18P22-201ENST00000402024 1347 ntBASIC23.29■■□□□ 1.32
CTNND1O60716 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.29■■□□□ 1.32
CTNND1O60716 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
CTNND1O60716 AC116351.2-201ENST00000606540 1585 ntBASIC23.28■■□□□ 1.32
CTNND1O60716 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.28■■□□□ 1.32
CTNND1O60716 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CTNND1O60716 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTNND1O60716 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTNND1O60716 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTNND1O60716 AC113347.1-201ENST00000413321 391 ntBASIC23.28■■□□□ 1.32
CTNND1O60716 KRT18P35-201ENST00000510488 1269 ntBASIC23.28■■□□□ 1.32
CTNND1O60716 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.28■■□□□ 1.32
CTNND1O60716 AL049597.2-201ENST00000565575 961 ntBASIC23.28■■□□□ 1.32
CTNND1O60716 AL445675.2-201ENST00000620291 557 ntBASIC23.28■■□□□ 1.32
CTNND1O60716 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CTNND1O60716 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CTNND1O60716 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CTNND1O60716 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTNND1O60716 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.27■■□□□ 1.32
CTNND1O60716 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CTNND1O60716 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.27■■□□□ 1.32
CTNND1O60716 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.27■■□□□ 1.32
CTNND1O60716 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.27■■□□□ 1.32
CTNND1O60716 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
CTNND1O60716 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CTNND1O60716 TFP1-202ENST00000475455 1573 ntBASIC23.27■■□□□ 1.32
CTNND1O60716 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CTNND1O60716 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms