Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PLOD3O60568 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PLOD3O60568 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.72■□□□□ 0.59
PLOD3O60568 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PLOD3O60568 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.72■□□□□ 0.59
PLOD3O60568 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PLOD3O60568 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.72■□□□□ 0.59
PLOD3O60568 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.72■□□□□ 0.59
PLOD3O60568 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.71■□□□□ 0.59
PLOD3O60568 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PLOD3O60568 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.71■□□□□ 0.59
PLOD3O60568 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.71■□□□□ 0.59
PLOD3O60568 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.71■□□□□ 0.59
PLOD3O60568 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.71■□□□□ 0.59
PLOD3O60568 AL109923.1-201ENST00000618799 583 ntBASIC18.71■□□□□ 0.59
PLOD3O60568 KRT8P20-201ENST00000423953 1409 ntBASIC18.71■□□□□ 0.59
PLOD3O60568 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.71■□□□□ 0.59
PLOD3O60568 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PLOD3O60568 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.71■□□□□ 0.58
PLOD3O60568 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.7■□□□□ 0.58
PLOD3O60568 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PLOD3O60568 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PLOD3O60568 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.7■□□□□ 0.58
PLOD3O60568 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PLOD3O60568 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.7■□□□□ 0.58
PLOD3O60568 DUSP5P2-201ENST00000426873 1033 ntBASIC18.7■□□□□ 0.58
PLOD3O60568 AC073210.2-201ENST00000430369 194 ntBASIC18.7■□□□□ 0.58
PLOD3O60568 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.7■□□□□ 0.58
PLOD3O60568 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.7■□□□□ 0.58
PLOD3O60568 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.7■□□□□ 0.58
PLOD3O60568 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.7■□□□□ 0.58
PLOD3O60568 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.7■□□□□ 0.58
PLOD3O60568 AC091874.3-201ENST00000512672 1195 ntBASIC18.7■□□□□ 0.58
PLOD3O60568 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.7■□□□□ 0.58
PLOD3O60568 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PLOD3O60568 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PLOD3O60568 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.7■□□□□ 0.58
PLOD3O60568 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.7■□□□□ 0.58
PLOD3O60568 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PLOD3O60568 TCF3P1-201ENST00000423021 1937 ntBASIC18.7■□□□□ 0.58
PLOD3O60568 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PLOD3O60568 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.7■□□□□ 0.58
PLOD3O60568 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PLOD3O60568 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PLOD3O60568 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 HLA-G-202ENST00000376815 851 ntBASIC18.69■□□□□ 0.58
PLOD3O60568 HLA-G-203ENST00000376818 1127 ntBASIC18.69■□□□□ 0.58
PLOD3O60568 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.69■□□□□ 0.58
PLOD3O60568 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.69■□□□□ 0.58
PLOD3O60568 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.69■□□□□ 0.58
PLOD3O60568 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PLOD3O60568 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
PLOD3O60568 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PLOD3O60568 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.68■□□□□ 0.58
PLOD3O60568 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PLOD3O60568 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PLOD3O60568 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.68■□□□□ 0.58
PLOD3O60568 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PLOD3O60568 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.68■□□□□ 0.58
PLOD3O60568 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.68■□□□□ 0.58
PLOD3O60568 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.68■□□□□ 0.58
PLOD3O60568 AC142086.2-201ENST00000569753 217 ntBASIC18.68■□□□□ 0.58
PLOD3O60568 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PLOD3O60568 AC104771.1-201ENST00000603335 964 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms