Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC011453.2-201ENST00000603737 729 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC007262.1-201ENST00000604099 321 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 IFITM2-206ENST00000616316 892 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AL354751.3-201ENST00000618526 1027 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC007792.1-201ENST00000623023 402 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC005005.3-201ENST00000609017 1410 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC108463.3-201ENST00000603748 1482 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC090181.3-201ENST00000624777 1514 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 GNL3LP1-201ENST00000399458 1643 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 PNMA8C-201ENST00000617053 4255 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 RNU6-543P-201ENST00000362576 108 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 RNU6-845P-201ENST00000362578 103 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 RN7SKP294-201ENST00000362770 338 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 RNU6-433P-201ENST00000363216 104 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 RNU5D-1-201ENST00000363299 116 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 RNU6-1085P-201ENST00000363576 107 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 SNORA51.2-201ENST00000364595 132 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 INIP-201ENST00000374234 713 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 SNRPEP2-201ENST00000397592 279 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 LARP1P1-201ENST00000407692 292 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 MIR1284-201ENST00000408337 120 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 MORN2-202ENST00000409077 465 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 VN1R33P-201ENST00000411800 887 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 VDAC1P6-201ENST00000430062 855 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 LINC01655-201ENST00000431729 423 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AL358934.1-201ENST00000432346 324 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 MTND3P2-201ENST00000438452 342 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 CALM1P1-201ENST00000442082 433 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 NSRP1P1-201ENST00000444067 1693 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 PMS2P10-201ENST00000447708 612 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 ARPC3P5-201ENST00000448802 534 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 LINC01501-203ENST00000449990 791 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC005020.1-201ENST00000455459 526 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 RN7SL7P-201ENST00000467823 298 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 GJA1P1-201ENST00000511478 1143 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 HSPA8P13-201ENST00000523715 472 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 RAET1E-205ENST00000529948 875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
USB1Q9BQ65 SP110-215ENST00000540870 2032 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC112694.1-201ENST00000541939 570 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 DTL-206ENST00000542077 4471 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 C12orf73-203ENST00000546540 590 ntTSL 2 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 MOK-239ENST00000561150 568 ntTSL 4 BASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC091962.1-201ENST00000561496 1765 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 AP006545.1-201ENST00000563059 911 ntBASIC8.16□□□□□ -1.1
USB1Q9BQ65 AC107954.1-201ENST00000565906 727 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms