Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC005785.2-201ENST00000624655 631 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AP002370.1-201ENST00000528055 1602 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RNA5SP448-201ENST00000363151 111 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RNA5SP472-201ENST00000363868 119 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RN7SKP237-201ENST00000364663 301 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 OR2T4-202ENST00000366475 1047 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC017104.2-201ENST00000417000 321 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AL604028.2-201ENST00000437848 788 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC108039.2-201ENST00000440214 359 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC018892.2-201ENST00000457656 693 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RPL34P34-201ENST00000465389 354 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RN7SL392P-201ENST00000473024 299 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC117395.1-201ENST00000487390 403 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RN7SL516P-201ENST00000496127 297 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 NDUFA3P4-201ENST00000560814 250 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 ACTG1P15-201ENST00000570019 1063 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 MIR4266-201ENST00000583300 55 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AL023806.2-201ENST00000603042 263 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 RPS28P1-201ENST00000604589 187 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC027271.1-201ENST00000610270 610 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC135050.6-202ENST00000613584 392 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 MIR6723-201ENST00000621981 89 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 AC125232.1-201ENST00000452554 1408 ntBASIC5.05□□□□□ -1.6
AP1S3Q96PC3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
AP1S3Q96PC3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
AP1S3Q96PC3 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms