Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 RN7SKP72-201ENST00000362327 292 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 Y_RNA.311-201ENST00000365068 96 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MIR525-201ENST00000384978 85 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 SNORD83A-201ENST00000386747 95 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 RNU6-575P-201ENST00000411326 105 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC004129.1-201ENST00000417617 796 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC132217.1-201ENST00000430034 373 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MTND3P21-201ENST00000433774 331 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 ARAFP2-201ENST00000440565 559 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL353093.1-201ENST00000441292 436 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 TCEA1P3-201ENST00000443005 880 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 PMS2P10-201ENST00000447708 612 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL507P-201ENST00000474076 296 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 RN7SL316P-201ENST00000483452 272 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 ACTG1P13-201ENST00000486987 1043 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC109471.1-201ENST00000511631 612 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 LINC01095-203ENST00000512063 1175 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC116347.2-201ENST00000514912 523 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 RN7SKP244-201ENST00000516513 307 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MED28P5-201ENST00000528254 438 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AP001804.2-201ENST00000533932 910 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 OR6C7P-201ENST00000547875 934 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL442663.4-201ENST00000555304 289 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 NIFKP8-201ENST00000560500 874 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 BGLT3-201ENST00000564523 994 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 BMS1P8-201ENST00000565049 1178 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 TPRKBP2-201ENST00000565969 475 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MIR3650-201ENST00000581972 60 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 VN1R92P-201ENST00000598511 928 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC011894.1-201ENST00000603255 456 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL356458.1-201ENST00000604764 465 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 ASNSD1-207ENST00000607535 579 ntTSL 3 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC106028.5-201ENST00000610332 395 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 YARS-210ENST00000616261 1167 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CDK2AP2P1-201ENST00000617479 328 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 XRCC6P5-201ENST00000435236 1795 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC010533.1-201ENST00000624875 2105 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 MFSD8-256ENST00000641949 1640 ntBASIC7.96□□□□□ -1.14
DEPDC4Q8N2C3 AC092999.1-201ENST00000624004 1924 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 MAPK10-354ENST00000641823 2732 ntBASIC7.95□□□□□ -1.14
DEPDC4Q8N2C3 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms