Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AL035555.1-201ENST00000404462 1790 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 RNU6-618P-201ENST00000363518 112 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 PHBP1-201ENST00000392260 808 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 HMGB3P19-201ENST00000403971 560 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL355375.1-201ENST00000405686 392 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 CDK8P2-201ENST00000415020 547 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC092042.2-201ENST00000417304 331 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 OR6C64P-201ENST00000419708 825 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 MTCO3P1-205ENST00000422088 832 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 GYG1P2-201ENST00000426437 1006 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 ZNF965P-201ENST00000432501 817 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 GAPDHP75-201ENST00000433910 943 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL954705.1-201ENST00000435277 559 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC091862.1-201ENST00000438016 1100 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 RHEBP2-201ENST00000450289 600 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 FTH1P7-201ENST00000450676 552 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC093752.1-206ENST00000511823 336 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 COX4I1P1-201ENST00000554239 509 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 OR11J5P-201ENST00000556889 934 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC087481.2-201ENST00000565492 330 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC136944.5-201ENST00000573021 151 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 LINC00674-202ENST00000590734 160 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 OR7A11P-201ENST00000597719 953 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC112230.1-201ENST00000604342 547 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 Z82195.1-201ENST00000604558 398 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 MARK3P1-201ENST00000604796 643 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AC093875.1-201ENST00000623688 504 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 THAP12P7-201ENST00000520248 2290 ntBASIC7.04□□□□□ -1.28
ATG4DQ86TL0 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.04□□□□□ -1.28
ATG4DQ86TL0 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms