Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 PABPC1P1-201ENST00000506347 591 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 RNA5SP518-201ENST00000515957 119 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 OSBPL9P3-201ENST00000534523 595 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 ULK4P1-202ENST00000565174 503 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC023827.2-201ENST00000566880 1061 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.48□□□□□ -1.37
SUMO3P55854 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
SUMO3P55854 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.48□□□□□ -1.37
SUMO3P55854 RN7SL697P-201ENST00000582484 299 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 BNIP3P40-201ENST00000596017 556 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC073333.2-201ENST00000603589 769 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC004775.1-201ENST00000607389 753 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC097504.2-201ENST00000608088 454 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AL592494.3-201ENST00000609485 464 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.48□□□□□ -1.37
SUMO3P55854 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 AC245389.2-201ENST00000616023 576 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AL645927.2-201ENST00000618350 349 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC242843.1-201ENST00000618702 573 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AP001002.2-201ENST00000625137 386 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.48□□□□□ -1.37
SUMO3P55854 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.48□□□□□ -1.37
SUMO3P55854 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 NEK2P2-201ENST00000438441 1338 ntBASIC6.48□□□□□ -1.37
SUMO3P55854 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SUMO3P55854 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SUMO3P55854 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.48□□□□□ -1.37
SUMO3P55854 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 RPL10P16-201ENST00000325000 645 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 MIR1204-201ENST00000408388 67 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 AL356968.2-201ENST00000412769 1257 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 CYP4F32P-201ENST00000426492 504 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SUMO3P55854 OR13C1P-201ENST00000457612 963 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AC091982.1-202ENST00000473923 343 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 NACAP6-201ENST00000509572 622 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 AC093770.1-201ENST00000511559 571 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.47□□□□□ -1.37
SUMO3P55854 SCARNA1-201ENST00000517138 166 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 HNRNPCP8-201ENST00000528764 888 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 OR5M6P-201ENST00000530227 937 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 OR4C1P-201ENST00000530880 937 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AC068339.2-201ENST00000534395 618 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.47□□□□□ -1.37
SUMO3P55854 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.47□□□□□ -1.37
SUMO3P55854 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.47□□□□□ -1.37
SUMO3P55854 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SUMO3P55854 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.47□□□□□ -1.37
SUMO3P55854 AC005242.1-201ENST00000585658 438 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
SUMO3P55854 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.47□□□□□ -1.37
SUMO3P55854 AC133794.1-201ENST00000602731 914 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AL035417.2-201ENST00000603887 796 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 QTRT1P1-201ENST00000604344 1078 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AC015849.2-201ENST00000605738 409 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 AL133370.2-201ENST00000619934 439 ntBASIC6.47□□□□□ -1.37
SUMO3P55854 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.47□□□□□ -1.37
SUMO3P55854 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SUMO3P55854 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms