Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.26□□□□□ -1.25
NEK3P51956 AC005517.1-201ENST00000452091 489 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 PABPC1P10-201ENST00000464731 381 ntBASIC7.26□□□□□ -1.25
NEK3P51956 RN7SL88P-201ENST00000480166 299 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AC008967.1-201ENST00000504843 163 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 AC017007.1-201ENST00000511960 415 ntBASIC7.26□□□□□ -1.25
NEK3P51956 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 SETP21-201ENST00000514799 892 ntBASIC7.26□□□□□ -1.25
NEK3P51956 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.26□□□□□ -1.25
NEK3P51956 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 AC027281.1-201ENST00000574178 758 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.26□□□□□ -1.25
NEK3P51956 RN7SL131P-201ENST00000579043 256 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AC015801.1-201ENST00000585651 153 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 AC084036.1-201ENST00000609190 508 ntBASIC7.26□□□□□ -1.25
NEK3P51956 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 PTCHD3P1-201ENST00000612350 537 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 AC104307.1-201ENST00000616142 196 ntBASIC7.26□□□□□ -1.25
NEK3P51956 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 AC020763.5-201ENST00000623298 430 ntBASIC7.26□□□□□ -1.25
NEK3P51956 AC034229.6-201ENST00000623704 224 ntBASIC7.26□□□□□ -1.25
NEK3P51956 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 AP000866.6-201ENST00000638898 3579 ntBASIC7.26□□□□□ -1.25
NEK3P51956 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
NEK3P51956 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NEK3P51956 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
NEK3P51956 OR2A3P-202ENST00000641249 1776 ntBASIC7.25□□□□□ -1.25
NEK3P51956 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.25□□□□□ -1.25
NEK3P51956 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 Z93929.1-201ENST00000418200 1475 ntBASIC7.25□□□□□ -1.25
NEK3P51956 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NEK3P51956 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NEK3P51956 AL353625.1-202ENST00000366273 571 ntBASIC7.25□□□□□ -1.25
NEK3P51956 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
NEK3P51956 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NEK3P51956 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.25□□□□□ -1.25
NEK3P51956 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.25□□□□□ -1.25
NEK3P51956 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.25□□□□□ -1.25
NEK3P51956 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 AL445528.1-201ENST00000426330 420 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AK3P5-201ENST00000432033 519 ntBASIC7.25□□□□□ -1.25
NEK3P51956 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NEK3P51956 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.25□□□□□ -1.25
NEK3P51956 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NEK3P51956 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.25□□□□□ -1.25
NEK3P51956 FABP5P2-201ENST00000439042 408 ntBASIC7.25□□□□□ -1.25
NEK3P51956 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.25□□□□□ -1.25
NEK3P51956 RPL21P33-201ENST00000444831 484 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AL500527.1-201ENST00000448532 255 ntBASIC7.25□□□□□ -1.25
NEK3P51956 SLAMF6P1-201ENST00000451067 602 ntBASIC7.25□□□□□ -1.25
NEK3P51956 EAF2-202ENST00000451944 960 ntTSL 2 BASIC7.25□□□□□ -1.25
NEK3P51956 EIF3LP2-201ENST00000457262 807 ntBASIC7.25□□□□□ -1.25
NEK3P51956 TREML3P-201ENST00000457327 501 ntBASIC7.25□□□□□ -1.25
NEK3P51956 RN7SL160P-201ENST00000468558 284 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AC131233.1-201ENST00000479200 955 ntBASIC7.25□□□□□ -1.25
NEK3P51956 RPL23AP68-201ENST00000480924 445 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.25□□□□□ -1.25
NEK3P51956 AC095057.1-201ENST00000507583 168 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.25□□□□□ -1.25
NEK3P51956 RNA5SP518-201ENST00000515957 119 ntBASIC7.25□□□□□ -1.25
NEK3P51956 SCARNA18.2-201ENST00000516882 84 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 AC107952.1-201ENST00000524200 376 ntBASIC7.25□□□□□ -1.25
NEK3P51956 OR5D2P-201ENST00000524390 911 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 EEF1B2P1-201ENST00000567221 672 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.25□□□□□ -1.25
NEK3P51956 PRR13P5-201ENST00000596581 442 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AC092032.1-201ENST00000603090 165 ntBASIC7.25□□□□□ -1.25
NEK3P51956 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.25□□□□□ -1.25
NEK3P51956 AC122710.3-201ENST00000606566 541 ntBASIC7.25□□□□□ -1.25
NEK3P51956 AC008833.1-201ENST00000611633 691 ntBASIC7.25□□□□□ -1.25
NEK3P51956 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC7.25□□□□□ -1.25
NEK3P51956 AL356585.10-201ENST00000641883 123 ntBASIC7.25□□□□□ -1.25
NEK3P51956 KARSP2-201ENST00000415696 1639 ntBASIC7.25□□□□□ -1.25
NEK3P51956 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms