Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.31□□□□□ -1.4
RFC3P40938 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RFC3P40938 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RFC3P40938 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 PABPC1P8-201ENST00000452851 2086 ntBASIC6.3□□□□□ -1.4
RFC3P40938 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC3P40938 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 CCDC150P1-201ENST00000537123 2215 ntBASIC6.3□□□□□ -1.4
RFC3P40938 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 OR10D1P-201ENST00000355343 936 ntBASIC6.3□□□□□ -1.4
RFC3P40938 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 MIR191-201ENST00000384873 92 ntBASIC6.3□□□□□ -1.4
RFC3P40938 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 E2F6P3-201ENST00000441743 743 ntBASIC6.3□□□□□ -1.4
RFC3P40938 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC3P40938 KF459542.1-201ENST00000450908 553 ntBASIC6.3□□□□□ -1.4
RFC3P40938 RPL7AP71-201ENST00000451120 739 ntBASIC6.3□□□□□ -1.4
RFC3P40938 AL034369.1-201ENST00000453808 477 ntBASIC6.3□□□□□ -1.4
RFC3P40938 AP005202.1-201ENST00000489915 867 ntBASIC6.3□□□□□ -1.4
RFC3P40938 RPL9P15-201ENST00000491096 532 ntBASIC6.3□□□□□ -1.4
RFC3P40938 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC3P40938 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.3□□□□□ -1.4
RFC3P40938 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.3□□□□□ -1.4
RFC3P40938 OR4C49P-201ENST00000563891 900 ntBASIC6.3□□□□□ -1.4
RFC3P40938 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 AC093283.1-201ENST00000565306 1075 ntBASIC6.3□□□□□ -1.4
RFC3P40938 MIR3135A-201ENST00000578460 77 ntBASIC6.3□□□□□ -1.4
RFC3P40938 AC138207.8-204ENST00000579588 527 ntBASIC6.3□□□□□ -1.4
RFC3P40938 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 AC211486.4-201ENST00000621495 113 ntBASIC6.3□□□□□ -1.4
RFC3P40938 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RFC3P40938 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RFC3P40938 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.3□□□□□ -1.4
RFC3P40938 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RFC3P40938 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RFC3P40938 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 FUNDC2P3-201ENST00000334716 533 ntBASIC6.29□□□□□ -1.4
RFC3P40938 RNA5SP382-201ENST00000363355 112 ntBASIC6.29□□□□□ -1.4
RFC3P40938 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 MTND4LP17-201ENST00000414607 293 ntBASIC6.29□□□□□ -1.4
RFC3P40938 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RFC3P40938 AC096632.2-201ENST00000438139 1239 ntBASIC6.29□□□□□ -1.4
RFC3P40938 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.29□□□□□ -1.4
RFC3P40938 AC064862.5-201ENST00000440618 334 ntBASIC6.29□□□□□ -1.4
RFC3P40938 AC092601.1-201ENST00000444526 383 ntBASIC6.29□□□□□ -1.4
RFC3P40938 CDY10P-201ENST00000452415 1567 ntBASIC6.29□□□□□ -1.4
RFC3P40938 RN7SL216P-201ENST00000471607 298 ntBASIC6.29□□□□□ -1.4
RFC3P40938 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 NACAP5-201ENST00000509863 636 ntBASIC6.29□□□□□ -1.4
RFC3P40938 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 AC093878.1-201ENST00000515630 432 ntBASIC6.29□□□□□ -1.4
RFC3P40938 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms