Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC118758.1-202ENST00000454719 225 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 RPS27P20-201ENST00000492051 246 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 RPL5P14-201ENST00000494197 878 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 H3F3AP3-201ENST00000497682 407 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 AL133399.1-201ENST00000527476 298 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.9□□□□□ -1.3
HMGA1P17096 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.9□□□□□ -1.3
HMGA1P17096 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 RN7SL230P-201ENST00000580835 303 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 MIR4271-201ENST00000582451 67 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.9□□□□□ -1.3
HMGA1P17096 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 AL122023.1-201ENST00000622847 530 ntBASIC6.9□□□□□ -1.3
HMGA1P17096 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.9□□□□□ -1.3
HMGA1P17096 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.9□□□□□ -1.3
HMGA1P17096 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.9□□□□□ -1.3
HMGA1P17096 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HMGA1P17096 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
HMGA1P17096 AC005839.1-201ENST00000624148 3213 ntBASIC6.9□□□□□ -1.31
HMGA1P17096 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HMGA1P17096 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HMGA1P17096 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HMGA1P17096 TATDN2P3-201ENST00000452855 3665 ntBASIC6.9□□□□□ -1.31
HMGA1P17096 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.31
HMGA1P17096 AC009166.2-201ENST00000624410 2833 ntBASIC6.9□□□□□ -1.31
HMGA1P17096 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
HMGA1P17096 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
HMGA1P17096 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
HMGA1P17096 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
HMGA1P17096 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.9□□□□□ -1.31
HMGA1P17096 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HMGA1P17096 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
HMGA1P17096 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGA1P17096 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGA1P17096 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 RNU1-65P-201ENST00000363919 148 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 GTF3AP6-201ENST00000432585 986 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 COX4I1P2-201ENST00000447446 547 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 CTSLP6-201ENST00000458273 1002 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 H3F3AP5-201ENST00000475267 429 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 RPL19P11-201ENST00000495944 589 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 AC018797.1-201ENST00000510791 255 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 BCAS2P1-201ENST00000528022 632 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGA1P17096 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 AC026898.1-201ENST00000586404 571 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGA1P17096 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGA1P17096 U1.41-201ENST00000617626 165 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 API5P1-201ENST00000424316 1510 ntBASIC6.89□□□□□ -1.31
HMGA1P17096 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGA1P17096 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
HMGA1P17096 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.89□□□□□ -1.31
HMGA1P17096 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HMGA1P17096 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.89□□□□□ -1.31
HMGA1P17096 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.89□□□□□ -1.31
HMGA1P17096 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HMGA1P17096 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms