Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
TPM1P09493 AC023632.6-201ENST00000624338 2177 ntBASIC7.4□□□□□ -1.23
TPM1P09493 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
TPM1P09493 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
TPM1P09493 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 AC096992.2-201ENST00000609553 1684 ntBASIC7.39□□□□□ -1.23
TPM1P09493 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
TPM1P09493 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
TPM1P09493 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 PPIAP26-201ENST00000377951 522 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AL035467.1-201ENST00000403583 686 ntBASIC7.39□□□□□ -1.23
TPM1P09493 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM1P09493 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM1P09493 AL139415.1-201ENST00000424862 352 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 KRT18P53-201ENST00000431919 117 ntBASIC7.39□□□□□ -1.23
TPM1P09493 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.39□□□□□ -1.23
TPM1P09493 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 TVP23CP1-201ENST00000450317 639 ntBASIC7.39□□□□□ -1.23
TPM1P09493 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 EIF3KP1-201ENST00000513279 656 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AC100854.1-201ENST00000520351 341 ntBASIC7.39□□□□□ -1.23
TPM1P09493 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM1P09493 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 AC020914.7-201ENST00000594477 545 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AL078623.1-201ENST00000602702 907 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM1P09493 AL352984.2-202ENST00000613699 155 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.39□□□□□ -1.23
TPM1P09493 AC012653.2-201ENST00000621880 420 ntBASIC7.39□□□□□ -1.23
TPM1P09493 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM1P09493 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.39□□□□□ -1.23
TPM1P09493 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM1P09493 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM1P09493 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
TPM1P09493 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.39□□□□□ -1.23
TPM1P09493 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TPM1P09493 AC009831.5-201ENST00000624000 3189 ntBASIC7.38□□□□□ -1.23
TPM1P09493 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM1P09493 MTCO1P25-201ENST00000414449 1799 ntBASIC7.38□□□□□ -1.23
TPM1P09493 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM1P09493 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM1P09493 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
TPM1P09493 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 SAMMSON-210ENST00000641260 1308 ntBASIC7.38□□□□□ -1.23
TPM1P09493 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
TPM1P09493 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
TPM1P09493 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
TPM1P09493 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 PPIL1P1-201ENST00000423936 499 ntBASIC7.38□□□□□ -1.23
TPM1P09493 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM1P09493 AC239367.3-201ENST00000428996 814 ntBASIC7.38□□□□□ -1.23
TPM1P09493 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM1P09493 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
TPM1P09493 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM1P09493 AC002075.1-201ENST00000457396 676 ntBASIC7.38□□□□□ -1.23
TPM1P09493 AC083806.1-201ENST00000468934 316 ntBASIC7.38□□□□□ -1.23
TPM1P09493 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.38□□□□□ -1.23
TPM1P09493 IGHV3-57-201ENST00000520143 280 ntBASIC7.38□□□□□ -1.23
TPM1P09493 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.38□□□□□ -1.23
TPM1P09493 AP003084.1-201ENST00000524828 742 ntBASIC7.38□□□□□ -1.23
TPM1P09493 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.38□□□□□ -1.23
TPM1P09493 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
TPM1P09493 AL136139.1-201ENST00000605568 222 ntBASIC7.38□□□□□ -1.23
TPM1P09493 AC113361.1-201ENST00000606683 543 ntBASIC7.38□□□□□ -1.23
TPM1P09493 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 OR5M2P-202ENST00000641241 4242 ntBASIC7.38□□□□□ -1.23
TPM1P09493 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
TPM1P09493 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.38□□□□□ -1.23
TPM1P09493 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms