Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ERHP2-201ENST00000402323 299 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MTCO3P31-201ENST00000405526 789 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 RPL21P107-201ENST00000411449 460 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AF228730.4-201ENST00000421457 183 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 NEK2P4-201ENST00000425793 1329 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL136231.1-201ENST00000429407 730 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 TRIM60P3Y-201ENST00000432201 673 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL606662.1-201ENST00000445763 553 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MTND6P5-201ENST00000448266 512 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 USP9YP34-201ENST00000453983 808 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL368P-201ENST00000473384 277 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL107P-201ENST00000478127 283 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL608P-201ENST00000492377 279 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL024509.2-201ENST00000493462 493 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 OR7E129P-201ENST00000504655 968 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 ERCC6-208ENST00000515869 3439 ntTSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 RNU6-507P-201ENST00000516045 100 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 HIGD1AP18-201ENST00000520730 278 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC123904.3-201ENST00000547218 814 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 NOP56P3-201ENST00000549457 385 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC010198.2-201ENST00000550612 259 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 ISCA1P3-201ENST00000577104 373 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MIR4450-201ENST00000583589 65 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AP000907.4-201ENST00000604143 237 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC090578.1-201ENST00000604955 591 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 MIR6872-201ENST00000612981 62 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC007014.2-201ENST00000615581 479 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL133370.2-201ENST00000619934 439 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL359757.1-201ENST00000623176 255 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AC005538.2-201ENST00000623215 1864 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AP002505.2-201ENST00000623585 696 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 AL357140.4-201ENST00000636827 412 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 OR8G3P-202ENST00000641572 1255 ntBASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
CUEDC1Q9NWM3 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 GUCY2GP-201ENST00000479705 3222 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC010200.1-201ENST00000547380 1454 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AL133268.1-201ENST00000405676 1401 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 MTND4P12-201ENST00000498999 1377 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms