Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 RNA5SP251-201ENST00000410614 137 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 GAPDHP69-201ENST00000425504 1008 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AP006193.1-201ENST00000440724 485 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC079781.1-201ENST00000441505 394 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC013429.1-201ENST00000456604 422 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 SNORA81.1-201ENST00000458922 177 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 RN7SL165P-201ENST00000477476 291 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 RN7SL239P-201ENST00000490061 300 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC127024.1-201ENST00000490847 418 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC087752.2-201ENST00000521219 281 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 SETP3-201ENST00000581726 813 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 OR6L2P-201ENST00000608207 925 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC091768.1-201ENST00000609258 930 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC004836.1-201ENST00000623032 634 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC120057.5-201ENST00000623840 154 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AL136298.2-201ENST00000556497 1570 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC013488.1-201ENST00000526618 1838 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RPL12P1-201ENST00000374520 498 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC130472.1-201ENST00000427885 309 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 FDPSP8-201ENST00000438304 1089 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RNA5SP422-201ENST00000516778 111 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 ATP5J2P4-201ENST00000538774 267 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL355076.3-201ENST00000555838 587 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 MIR3159-201ENST00000584572 74 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL583832.1-201ENST00000603227 784 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 AL109936.2-201ENST00000605350 650 ntBASIC5.06□□□□□ -1.6
AP1S3Q96PC3 RPL17P3-201ENST00000605695 525 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 665.9 ms