Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RPS21P8-201ENST00000413365 247 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RPSAP60-201ENST00000415403 880 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 NDUFA5P8-201ENST00000449019 346 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RPS26P11-201ENST00000463445 348 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RPS26P6-201ENST00000475156 348 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SL379P-201ENST00000479912 293 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 MIR4800-201ENST00000537353 80 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 RPL41P2-201ENST00000544920 409 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AL512413.1-201ENST00000606489 382 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AL133445.2-201ENST00000611191 527 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 TATDN2P3-201ENST00000452855 3665 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 ATP5BP1-201ENST00000411980 1574 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 AC127070.3-201ENST00000503695 3263 ntBASIC7.76□□□□□ -1.17
CDK5RAP3Q96JB5 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AP005139.1-201ENST00000580702 1647 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SKP271-201ENST00000410528 320 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 MTND2P11-201ENST00000423638 648 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC079193.1-201ENST00000460497 588 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 RPS10P28-201ENST00000480396 498 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 SNORD116-30-201ENST00000516468 85 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 RNU4-18P-201ENST00000516751 149 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SKP11-201ENST00000517018 287 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC021820.1-201ENST00000525564 808 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC126323.4-201ENST00000566935 234 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC091167.5-201ENST00000605689 894 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 TMEM14EP-202ENST00000639378 1296 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 DLEU2L-201ENST00000371086 3555 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AC009237.3-203ENST00000442128 3551 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 AL669831.5-218ENST00000591702 1873 ntBASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP3Q96JB5 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC093844.1-201ENST00000514910 1361 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AL589826.1-201ENST00000340697 249 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC083799.1-201ENST00000366451 910 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 RNU1-56P-201ENST00000391303 164 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 322.7 ms