Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.18□□□□□ -1.42
NHLRC1Q6VVB1 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.18□□□□□ -1.42
NHLRC1Q6VVB1 UGT2B27P-201ENST00000505092 1620 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC083806.2-201ENST00000617795 2685 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC023886.2-201ENST00000321285 411 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC024937.2-201ENST00000411669 1242 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 GAPDHP69-201ENST00000425504 1008 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 NPM1P48-201ENST00000436002 853 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC027124.1-201ENST00000440852 466 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AL354714.5-201ENST00000450131 590 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 RPL7AP71-201ENST00000451120 739 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC068522.1-201ENST00000482895 345 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 RNU6-1334P-201ENST00000516032 105 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 NXPE2P1-201ENST00000543705 726 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AL135978.1-201ENST00000553618 1266 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 RN7SL42P-201ENST00000579786 294 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AP001542.1-201ENST00000591314 200 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC131009.3-201ENST00000621809 287 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AC073263.3-201ENST00000624449 858 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 ATP5BP1-201ENST00000411980 1574 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 CDY11P-201ENST00000447168 1651 ntBASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.17□□□□□ -1.42
NHLRC1Q6VVB1 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ICE2P1-201ENST00000512800 1849 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 RPL24P4-201ENST00000326586 421 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 RN7SKP137-201ENST00000411074 307 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 UBE2V2P1-201ENST00000434717 398 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms