Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 SNORA38B-201ENST00000363524 131 ntBASIC5.55□□□□□ -1.52
LMO4P61968 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 U3.52-201ENST00000384034 216 ntBASIC5.55□□□□□ -1.52
LMO4P61968 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LMO4P61968 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 RN7SKP129-201ENST00000410288 299 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 GPN3P1-201ENST00000423883 535 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LMO4P61968 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 GAPDHP34-201ENST00000432112 823 ntBASIC5.55□□□□□ -1.52
LMO4P61968 RPSAP32-201ENST00000432681 526 ntBASIC5.55□□□□□ -1.52
LMO4P61968 PCNPP2-201ENST00000441651 455 ntBASIC5.55□□□□□ -1.52
LMO4P61968 GAPDHP33-201ENST00000443168 1013 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 EEF1B2P3-201ENST00000447718 678 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC026826.1-201ENST00000493002 361 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC106822.1-201ENST00000502647 526 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 NATP-201ENST00000523491 878 ntBASIC5.55□□□□□ -1.52
LMO4P61968 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.55□□□□□ -1.52
LMO4P61968 RN7SL270P-201ENST00000579643 281 ntBASIC5.55□□□□□ -1.52
LMO4P61968 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC063977.7-201ENST00000594454 337 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 SNORD96A-201ENST00000606577 79 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC005828.7-201ENST00000607331 556 ntBASIC5.55□□□□□ -1.52
LMO4P61968 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 uc_338.29-201ENST00000615099 168 ntBASIC5.55□□□□□ -1.52
LMO4P61968 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 RPSAP68-201ENST00000625020 438 ntBASIC5.55□□□□□ -1.52
LMO4P61968 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 AC096992.2-201ENST00000609553 1684 ntBASIC5.55□□□□□ -1.52
LMO4P61968 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 DYNC1I2P1-201ENST00000435916 1838 ntBASIC5.55□□□□□ -1.52
LMO4P61968 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC5.55□□□□□ -1.52
LMO4P61968 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.55□□□□□ -1.52
LMO4P61968 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
LMO4P61968 AC007998.4-201ENST00000612496 2533 ntBASIC5.54□□□□□ -1.52
LMO4P61968 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LMO4P61968 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC5.54□□□□□ -1.52
LMO4P61968 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 MIR621-201ENST00000384919 96 ntBASIC5.54□□□□□ -1.52
LMO4P61968 MIR1204-201ENST00000408388 67 ntBASIC5.54□□□□□ -1.52
LMO4P61968 RANP6-201ENST00000413691 644 ntBASIC5.54□□□□□ -1.52
LMO4P61968 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 RPS7P12-201ENST00000422385 582 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 DUTP4-201ENST00000424782 475 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 AC097359.1-201ENST00000447946 463 ntBASIC5.54□□□□□ -1.52
LMO4P61968 RBMY2BP-202ENST00000451071 1156 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AC007688.1-201ENST00000475592 759 ntBASIC5.54□□□□□ -1.52
LMO4P61968 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 AC122713.1-201ENST00000518368 1015 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 AC124891.1-201ENST00000536322 519 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AL591767.3-201ENST00000554632 525 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.54□□□□□ -1.52
LMO4P61968 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.54□□□□□ -1.52
LMO4P61968 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 AC092718.4-201ENST00000566639 716 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.54□□□□□ -1.52
LMO4P61968 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms