Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP429-201ENST00000363688 109 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 RN7SKP36-201ENST00000363997 312 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
ERCC3P19447 AL662791.3-201ENST00000413771 776 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 CDY17P-201ENST00000414121 1282 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 VN1R42P-201ENST00000424651 344 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 CDY8P-201ENST00000428380 1279 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC8.61□□□□□ -1.03
ERCC3P19447 ELOCP13-201ENST00000443934 329 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 RPL6P5-201ENST00000445678 828 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 CDY20P-201ENST00000447528 1279 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.61□□□□□ -1.03
ERCC3P19447 AL009048.1-201ENST00000450437 298 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AC073476.1-201ENST00000452854 407 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.61□□□□□ -1.03
ERCC3P19447 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 RPL21P42-201ENST00000488408 464 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.61□□□□□ -1.03
ERCC3P19447 AC008427.1-201ENST00000503102 655 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AC093534.1-201ENST00000504977 132 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.61□□□□□ -1.03
ERCC3P19447 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC8.61□□□□□ -1.03
ERCC3P19447 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.61□□□□□ -1.03
ERCC3P19447 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
ERCC3P19447 AL591222.2-201ENST00000604443 754 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AL592494.3-201ENST00000609485 464 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 AL121782.1-201ENST00000611242 413 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
ERCC3P19447 AC073488.8-201ENST00000631952 757 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.61□□□□□ -1.03
ERCC3P19447 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
ERCC3P19447 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
ERCC3P19447 Z99129.4-201ENST00000624649 2435 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.6□□□□□ -1.03
ERCC3P19447 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 XRCC6P2-201ENST00000457831 1822 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 AL078621.1-201ENST00000272567 768 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 OR7A2P-201ENST00000304105 930 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 RNU6-354P-201ENST00000383862 107 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 RNU6-610P-201ENST00000384264 107 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC007068.1-201ENST00000396690 844 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 SNORA79B-201ENST00000410557 148 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.6□□□□□ -1.03
ERCC3P19447 RPL36P1-201ENST00000419720 225 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.6□□□□□ -1.03
ERCC3P19447 AC046176.1-201ENST00000435260 1170 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 RPL6P30-201ENST00000443382 862 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 RBMY2EP-202ENST00000456360 940 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC025271.1-201ENST00000485045 429 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 RPL7L1P7-201ENST00000509986 724 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.6□□□□□ -1.03
ERCC3P19447 NDUFA3P2-201ENST00000531434 232 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 PDCL3P1-201ENST00000534575 734 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC068790.1-201ENST00000536166 355 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.6□□□□□ -1.03
ERCC3P19447 COX4I1P1-201ENST00000554239 509 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AL121839.1-201ENST00000556233 1185 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC8.6□□□□□ -1.03
ERCC3P19447 PRELID3BP3-201ENST00000584963 545 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
ERCC3P19447 BMS1P7-201ENST00000602440 1052 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AP004372.1-201ENST00000604842 844 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 AC113361.1-201ENST00000606683 543 ntBASIC8.6□□□□□ -1.03
ERCC3P19447 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.6□□□□□ -1.03
ERCC3P19447 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.6□□□□□ -1.03
ERCC3P19447 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms