Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC023389.2-201ENST00000580031 955 ntBASIC8.18□□□□□ -1.1
CHGBP05060 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 AL008582.1-201ENST00000609612 442 ntBASIC8.18□□□□□ -1.1
CHGBP05060 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.18□□□□□ -1.1
CHGBP05060 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.18□□□□□ -1.1
CHGBP05060 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 AC079949.2-201ENST00000617117 2933 ntBASIC8.18□□□□□ -1.1
CHGBP05060 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHGBP05060 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.18□□□□□ -1.1
CHGBP05060 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 AL031123.3-201ENST00000623345 1837 ntBASIC8.17□□□□□ -1.1
CHGBP05060 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 RNA5SP308-201ENST00000362532 115 ntBASIC8.17□□□□□ -1.1
CHGBP05060 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 RNU6-167P-201ENST00000384292 106 ntBASIC8.17□□□□□ -1.1
CHGBP05060 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CHGBP05060 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 AL359694.1-201ENST00000403247 604 ntBASIC8.17□□□□□ -1.1
CHGBP05060 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 AC068138.1-201ENST00000412635 217 ntBASIC8.17□□□□□ -1.1
CHGBP05060 FAM183DP-201ENST00000421987 399 ntBASIC8.17□□□□□ -1.1
CHGBP05060 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.17□□□□□ -1.1
CHGBP05060 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.17□□□□□ -1.1
CHGBP05060 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.17□□□□□ -1.1
CHGBP05060 VN1R48P-201ENST00000448149 1036 ntBASIC8.17□□□□□ -1.1
CHGBP05060 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.17□□□□□ -1.1
CHGBP05060 AL390728.3-201ENST00000452704 270 ntBASIC8.17□□□□□ -1.1
CHGBP05060 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.17□□□□□ -1.1
CHGBP05060 AC018635.1-201ENST00000468292 1030 ntBASIC8.17□□□□□ -1.1
CHGBP05060 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CHGBP05060 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.17□□□□□ -1.1
CHGBP05060 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC8.17□□□□□ -1.1
CHGBP05060 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.17□□□□□ -1.1
CHGBP05060 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC8.17□□□□□ -1.1
CHGBP05060 AC027796.1-201ENST00000575593 512 ntBASIC8.17□□□□□ -1.1
CHGBP05060 ARGFXP2-201ENST00000579304 949 ntBASIC8.17□□□□□ -1.1
CHGBP05060 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.17□□□□□ -1.1
CHGBP05060 AC068313.1-201ENST00000604028 1008 ntBASIC8.17□□□□□ -1.1
CHGBP05060 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.17□□□□□ -1.1
CHGBP05060 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.17□□□□□ -1.1
CHGBP05060 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.17□□□□□ -1.1
CHGBP05060 FO681491.1-202ENST00000623392 737 ntBASIC8.17□□□□□ -1.1
CHGBP05060 AC006927.4-201ENST00000639187 543 ntBASIC8.17□□□□□ -1.1
CHGBP05060 AC119674.1-217ENST00000641942 1086 ntBASIC8.17□□□□□ -1.1
CHGBP05060 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 AP003119.3-201ENST00000566747 4192 ntBASIC8.17□□□□□ -1.1
CHGBP05060 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.17□□□□□ -1.1
CHGBP05060 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.17□□□□□ -1.1
CHGBP05060 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
CHGBP05060 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHGBP05060 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.16□□□□□ -1.1
CHGBP05060 AL359263.1-201ENST00000441188 2796 ntBASIC8.16□□□□□ -1.1
CHGBP05060 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CHGBP05060 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CHGBP05060 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CHGBP05060 AL589794.1-201ENST00000424971 390 ntBASIC8.16□□□□□ -1.1
CHGBP05060 AHCYP8-201ENST00000425108 209 ntBASIC8.16□□□□□ -1.1
CHGBP05060 AP003385.1-201ENST00000426387 893 ntBASIC8.16□□□□□ -1.1
CHGBP05060 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC8.16□□□□□ -1.1
CHGBP05060 MTATP6P17-201ENST00000431030 672 ntBASIC8.16□□□□□ -1.1
CHGBP05060 SSXP3-201ENST00000442971 1300 ntBASIC8.16□□□□□ -1.1
CHGBP05060 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC8.16□□□□□ -1.1
CHGBP05060 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.16□□□□□ -1.1
CHGBP05060 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CHGBP05060 AC139713.1-202ENST00000512366 460 ntBASIC8.16□□□□□ -1.1
CHGBP05060 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms