Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX4O60224 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.28□□□□□ -1.4
SSX4O60224 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SSX4O60224 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.28□□□□□ -1.4
SSX4O60224 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSX4O60224 AC007114.2-201ENST00000576014 4281 ntBASIC6.28□□□□□ -1.4
SSX4O60224 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.4
SSX4O60224 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.27□□□□□ -1.4
SSX4O60224 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
SSX4O60224 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 SSX6-201ENST00000376932 562 ntBASIC6.27□□□□□ -1.41
SSX4O60224 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSX4O60224 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 NUCKS1P1-201ENST00000452067 703 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AC117395.2-201ENST00000463122 1128 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AC015820.1-201ENST00000473882 321 ntBASIC6.27□□□□□ -1.41
SSX4O60224 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 AC079594.1-201ENST00000489757 331 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AC008868.1-201ENST00000509786 737 ntBASIC6.27□□□□□ -1.41
SSX4O60224 MRPS5P3-201ENST00000515577 166 ntBASIC6.27□□□□□ -1.41
SSX4O60224 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AP004607.6-201ENST00000525033 1202 ntBASIC6.27□□□□□ -1.41
SSX4O60224 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 AC126177.6-201ENST00000550420 1009 ntBASIC6.27□□□□□ -1.41
SSX4O60224 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.27□□□□□ -1.41
SSX4O60224 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 AC137695.2-201ENST00000603123 754 ntBASIC6.27□□□□□ -1.41
SSX4O60224 COX6CP16-201ENST00000603667 216 ntBASIC6.27□□□□□ -1.41
SSX4O60224 NF1P10-201ENST00000613227 742 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.27□□□□□ -1.41
SSX4O60224 AC005355.2-201ENST00000625064 484 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 AL359694.2-201ENST00000567753 1615 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AL449283.1-201ENST00000602631 3403 ntBASIC6.27□□□□□ -1.41
SSX4O60224 AC093844.1-201ENST00000514910 1361 ntBASIC6.27□□□□□ -1.41
SSX4O60224 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 AL136298.2-201ENST00000556497 1570 ntBASIC6.27□□□□□ -1.41
SSX4O60224 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSX4O60224 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
SSX4O60224 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.27□□□□□ -1.41
SSX4O60224 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSX4O60224 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.26□□□□□ -1.41
SSX4O60224 TET1P1-201ENST00000426627 2301 ntBASIC6.26□□□□□ -1.41
SSX4O60224 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 RNU4-81P-201ENST00000363561 144 ntBASIC6.26□□□□□ -1.41
SSX4O60224 RN7SKP36-201ENST00000363997 312 ntBASIC6.26□□□□□ -1.41
SSX4O60224 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SSX4O60224 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 AL451061.1-201ENST00000407887 862 ntBASIC6.26□□□□□ -1.41
SSX4O60224 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 PSMC1P2-201ENST00000423961 1204 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.26□□□□□ -1.41
SSX4O60224 Z83313.1-201ENST00000433780 718 ntBASIC6.26□□□□□ -1.41
SSX4O60224 ANXA2P2-201ENST00000435128 1020 ntBASIC6.26□□□□□ -1.41
SSX4O60224 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.26□□□□□ -1.41
SSX4O60224 RPL29P7-201ENST00000440227 457 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms