Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 CASC19-243ENST00000641588 1546 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 CYP2G2P-201ENST00000594920 1485 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 RNA5SP382-201ENST00000363355 112 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 RN7SKP47-201ENST00000365347 328 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 MIR551B-201ENST00000384984 96 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 RN7SKP205-201ENST00000410999 307 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC091390.2-201ENST00000432573 374 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AL356121.1-201ENST00000442911 156 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 PGBD4P1-201ENST00000473644 407 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 RN7SL70P-201ENST00000478322 302 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 RPL5P33-201ENST00000487833 905 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC093878.1-201ENST00000515630 432 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 RN7SL66P-201ENST00000582099 264 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 AL512329.1-201ENST00000404600 1592 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 OGFOD1P1-201ENST00000447552 1592 ntBASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CLIP2Q9UDT6 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
CLIP2Q9UDT6 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CLIP2Q9UDT6 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 RPL36P18-201ENST00000419316 318 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC064862.5-201ENST00000440618 334 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC234771.4-201ENST00000441416 730 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AL034399.1-201ENST00000451535 380 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 NPM1P9-201ENST00000453156 844 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 NMNAT1P3-201ENST00000457517 888 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 SNRPCP11-201ENST00000492453 205 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 RN7SL143P-201ENST00000496780 297 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 RNA5SP278-201ENST00000517055 102 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 ULK4P1-202ENST00000565174 503 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC233699.1-201ENST00000569955 1168 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC007255.2-201ENST00000604053 631 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC092701.1-201ENST00000623627 1551 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 AC020978.6-201ENST00000571197 3177 ntBASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CLIP2Q9UDT6 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms