Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 SOD1P1-201ENST00000407803 440 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SKP137-201ENST00000411074 307 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AC008753.1-201ENST00000423096 284 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 BX005266.3-201ENST00000443013 1075 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 RBMY3AP-201ENST00000449381 1145 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 MED28P7-201ENST00000456611 530 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SL259P-201ENST00000478499 253 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AF305872.1-201ENST00000485217 471 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 IGLC4-201ENST00000517690 248 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 OR9L1P-201ENST00000529493 933 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 SSU72P6-201ENST00000532644 488 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AL354696.1-201ENST00000614652 497 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AL121985.3-201ENST00000620690 523 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AC132825.8-201ENST00000640783 297 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 MAPK10-379ENST00000642013 1385 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AL033543.1-201ENST00000623440 13454 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 AC022819.1-201ENST00000563495 3910 ntBASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
CDK5RAP3Q96JB5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 TRAV35-201ENST00000390462 330 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 PDCL3P5-201ENST00000398028 722 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 PSMC1P2-201ENST00000423961 1204 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ST13P21-201ENST00000453250 1098 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AL049829.1-201ENST00000465411 156 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC126615.1-201ENST00000470084 630 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 RPL21P42-201ENST00000488408 464 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AP002981.1-201ENST00000517692 975 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 DCN-215ENST00000550099 719 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC097641.3-201ENST00000613523 464 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AL391597.1-201ENST00000618707 694 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC102941.1-201ENST00000567616 1537 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AC139426.3-201ENST00000605648 2059 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 CR383656.5-201ENST00000547616 1340 ntBASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP3Q96JB5 AL451064.2-201ENST00000623514 1654 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms