Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPL26P37-201ENST00000411983 438 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 NRBF2P2-201ENST00000413087 861 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 RPS26P38-201ENST00000414476 348 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC007435.1-201ENST00000421086 415 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AL354983.1-201ENST00000434580 906 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 ASS1P5-201ENST00000435496 1239 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 COX6CP12-201ENST00000446748 202 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 RN7SL308P-201ENST00000464971 297 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC092989.1-201ENST00000481235 277 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC105252.1-201ENST00000503089 286 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 NENFP3-201ENST00000503735 313 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 SNORA31.13-201ENST00000516624 135 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC8.77□□□□□ -1.01
HLA-CQ95604 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 OR5AK3P-201ENST00000527486 1297 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.77□□□□□ -1.01
HLA-CQ95604 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC104046.1-201ENST00000559487 406 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC005498.1-201ENST00000592125 465 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AL049840.5-201ENST00000602827 552 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 AL078624.2-201ENST00000605063 554 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-CQ95604 AL157831.2-201ENST00000564681 3095 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 AC135731.2-201ENST00000603029 2098 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 DHRS9-206ENST00000436483 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 CLDN18-201ENST00000183605 3520 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 MAPK10-382ENST00000642023 2369 ntBASIC8.77□□□□□ -1.01
HLA-CQ95604 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-CQ95604 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1.01
HLA-CQ95604 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 PSEN1-204ENST00000394164 3046 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
HLA-CQ95604 SEMA3F-AS1-202ENST00000437204 2755 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-CQ95604 THNSL2-201ENST00000324166 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 RNF40-202ENST00000357890 3917 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-CQ95604 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
HLA-CQ95604 ZNF596-202ENST00000320552 2696 ntAPPRIS P1 TSL 4 BASIC8.76□□□□□ -1.01
HLA-CQ95604 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 RN7SKP226-201ENST00000364912 300 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 Y_RNA.509-201ENST00000384506 99 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 MT-TL1-201ENST00000386347 75 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 RPL5P20-201ENST00000403848 896 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 EEF1A1P40-201ENST00000412883 573 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 HMGB3P31-201ENST00000413333 595 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 OR2L6P-201ENST00000416377 940 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC019181.1-201ENST00000417151 310 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 RPSAP32-201ENST00000432681 526 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 TMX2P1-201ENST00000436507 708 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-CQ95604 HAUS6P3-201ENST00000456660 1107 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 RPS20P24-201ENST00000457473 361 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 RPS27AP2-201ENST00000457576 465 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC146507.1-201ENST00000468335 354 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 RN7SL228P-201ENST00000470060 303 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 PA2G4P4-201ENST00000473864 1182 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 RPL5P33-201ENST00000487833 905 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC083906.4-201ENST00000514634 987 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 SETP21-201ENST00000514799 892 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 NTAN1P2-201ENST00000515730 940 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 KCTD9P6-201ENST00000522306 950 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms