Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
ZNF549Q6P9A3 AC007485.2-201ENST00000623493 1667 ntBASIC6.71□□□□□ -1.33
ZNF549Q6P9A3 AC093844.1-201ENST00000514910 1361 ntBASIC6.71□□□□□ -1.33
ZNF549Q6P9A3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.71□□□□□ -1.33
ZNF549Q6P9A3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
ZNF549Q6P9A3 AC009120.2-204ENST00000621548 2032 ntBASIC6.71□□□□□ -1.33
ZNF549Q6P9A3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 OR10D1P-201ENST00000355343 936 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 RNU1-56P-201ENST00000391303 164 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AL713922.1-201ENST00000416477 747 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 RFESDP1-201ENST00000422350 461 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC117395.1-201ENST00000487390 403 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 RPL21P42-201ENST00000488408 464 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC023818.1-201ENST00000498379 384 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC091932.1-201ENST00000569381 427 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC010333.3-201ENST00000615100 402 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AL391262.2-201ENST00000622466 494 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC005753.1-201ENST00000623837 618 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 AC112243.1-201ENST00000623949 3851 ntBASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZNF549Q6P9A3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 CYCSP17-201ENST00000407870 315 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC009362.1-201ENST00000427253 406 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC239367.3-201ENST00000428996 814 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AL590128.1-201ENST00000433407 286 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 RPS10P28-201ENST00000480396 498 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC063943.2-201ENST00000495697 534 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 SNX18P23-201ENST00000510867 677 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 CARSP2-201ENST00000520688 277 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 EIF4EP5-201ENST00000528228 640 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 RN7SL131P-201ENST00000579043 256 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 RN7SL426P-201ENST00000579106 295 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AL590032.1-201ENST00000604920 252 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AL512413.1-201ENST00000606489 382 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 AC073862.4-201ENST00000622982 854 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms