Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RPL41P2-201ENST00000544920 409 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 RN7SL366P-201ENST00000577957 292 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC004805.3-201ENST00000603178 310 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 SNORD96A-201ENST00000606577 79 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 MIR6780B-201ENST00000610307 79 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AC010333.3-201ENST00000615100 402 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AL139805.2-201ENST00000455305 2433 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 SPATA31C2-201ENST00000324915 3777 ntBASIC8.08□□□□□ -1.12
PDS5AQ29RF7 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC8.08□□□□□ -1.12
PDS5AQ29RF7 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AL139184.1-202ENST00000422303 222 ntBASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC008753.1-201ENST00000423096 284 ntBASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC245452.2-201ENST00000435222 392 ntBASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC024405.1-201ENST00000532521 1042 ntBASIC8.07□□□□□ -1.12
PDS5AQ29RF7 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 BRAFP1-201ENST00000445336 2703 ntBASIC8.07□□□□□ -1.12
PDS5AQ29RF7 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC093278.2-201ENST00000564956 2485 ntBASIC8.07□□□□□ -1.12
PDS5AQ29RF7 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PDS5AQ29RF7 OR6M2P-202ENST00000641780 2063 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 RN7SKP129-201ENST00000410288 299 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 RN7SKP221-201ENST00000410420 301 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 GPN3P1-201ENST00000423883 535 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC091390.2-201ENST00000432573 374 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC007383.1-201ENST00000445875 636 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 SULT1D1P-201ENST00000458020 882 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 RPL29P23-201ENST00000486188 442 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 AC011891.2-201ENST00000604949 397 ntBASIC8.06□□□□□ -1.12
PDS5AQ29RF7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
PDS5AQ29RF7 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms