Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CEACAMP5-201ENST00000448037 961 ntBASIC7.66□□□□□ -1.18
CIITAP33076 NPM1P9-201ENST00000453156 844 ntBASIC7.66□□□□□ -1.18
CIITAP33076 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 AP003385.3-201ENST00000472498 287 ntBASIC7.66□□□□□ -1.18
CIITAP33076 RN7SL70P-201ENST00000478322 302 ntBASIC7.66□□□□□ -1.18
CIITAP33076 RPS7P11-201ENST00000484240 586 ntBASIC7.66□□□□□ -1.18
CIITAP33076 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC7.66□□□□□ -1.18
CIITAP33076 AC122713.1-201ENST00000518368 1015 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.66□□□□□ -1.18
CIITAP33076 CHEK2P2-201ENST00000554701 672 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.66□□□□□ -1.18
CIITAP33076 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 OR4C49P-201ENST00000563891 900 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 AC027796.1-201ENST00000575593 512 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 AC027559.1-201ENST00000636288 271 ntBASIC7.66□□□□□ -1.18
CIITAP33076 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AC009831.5-201ENST00000624000 3189 ntBASIC7.65□□□□□ -1.18
CIITAP33076 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CIITAP33076 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AC019178.1-201ENST00000392337 440 ntBASIC7.65□□□□□ -1.18
CIITAP33076 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.65□□□□□ -1.18
CIITAP33076 RPSAP41-201ENST00000439695 860 ntBASIC7.65□□□□□ -1.18
CIITAP33076 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.65□□□□□ -1.18
CIITAP33076 AC073476.1-201ENST00000452854 407 ntBASIC7.65□□□□□ -1.18
CIITAP33076 RPL26P30-201ENST00000453533 435 ntBASIC7.65□□□□□ -1.18
CIITAP33076 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 OR52H2P-201ENST00000514607 902 ntBASIC7.65□□□□□ -1.18
CIITAP33076 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 AL445383.1-201ENST00000554689 874 ntBASIC7.65□□□□□ -1.18
CIITAP33076 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.65□□□□□ -1.18
CIITAP33076 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.65□□□□□ -1.18
CIITAP33076 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 RN7SL199P-201ENST00000578752 281 ntBASIC7.65□□□□□ -1.18
CIITAP33076 RN7SL656P-201ENST00000579044 281 ntBASIC7.65□□□□□ -1.18
CIITAP33076 RN7SL404P-201ENST00000582421 281 ntBASIC7.65□□□□□ -1.18
CIITAP33076 AC091133.5-201ENST00000603088 301 ntBASIC7.65□□□□□ -1.18
CIITAP33076 AC079791.1-201ENST00000605356 973 ntBASIC7.65□□□□□ -1.18
CIITAP33076 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
CIITAP33076 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.65□□□□□ -1.18
CIITAP33076 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
CIITAP33076 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CIITAP33076 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CIITAP33076 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CIITAP33076 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.65□□□□□ -1.19
CIITAP33076 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CIITAP33076 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
CIITAP33076 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
CIITAP33076 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
CIITAP33076 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.65□□□□□ -1.19
CIITAP33076 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CIITAP33076 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
CIITAP33076 AC007998.4-201ENST00000612496 2533 ntBASIC7.64□□□□□ -1.19
CIITAP33076 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.64□□□□□ -1.19
CIITAP33076 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 AC123912.3-201ENST00000600907 1367 ntBASIC7.64□□□□□ -1.19
CIITAP33076 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms