Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.11□□□□□ -1.11
CNGA1P29973 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.11□□□□□ -1.11
CNGA1P29973 AC104997.1-201ENST00000519761 717 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 OXR1-212ENST00000521592 993 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 AP005597.2-201ENST00000526238 341 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AP001000.1-201ENST00000526843 742 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 AC090888.3-201ENST00000558917 509 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 MIR212-201ENST00000586026 110 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AC011500.1-201ENST00000601963 469 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 MIR7109-201ENST00000613748 65 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 MIR8089-201ENST00000620165 82 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 MIR6823-201ENST00000622118 61 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 AL391262.2-201ENST00000622466 494 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 UG0898H09-202ENST00000623646 7040 ntBASIC8.11□□□□□ -1.11
CNGA1P29973 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
CNGA1P29973 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CNGA1P29973 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CNGA1P29973 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC8.11□□□□□ -1.11
CNGA1P29973 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CNGA1P29973 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 CASC19-255ENST00000641733 1385 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.1□□□□□ -1.11
CNGA1P29973 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CNGA1P29973 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CNGA1P29973 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.1□□□□□ -1.11
CNGA1P29973 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 RN7SKP171-201ENST00000364417 303 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 RNA5SP152-201ENST00000365184 110 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC8.1□□□□□ -1.11
CNGA1P29973 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CNGA1P29973 RNA5SP155-201ENST00000411154 129 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.1□□□□□ -1.11
CNGA1P29973 AL593856.1-201ENST00000419949 805 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC8.1□□□□□ -1.11
CNGA1P29973 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC8.1□□□□□ -1.11
CNGA1P29973 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.1□□□□□ -1.11
CNGA1P29973 RPL31P53-201ENST00000457065 348 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 RN7SL180P-201ENST00000466769 294 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 MARK2P8-201ENST00000476069 952 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 RNU6-943P-201ENST00000516960 98 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AC021269.1-201ENST00000526860 705 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 OR5M6P-201ENST00000530227 937 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AC084851.2-201ENST00000530377 364 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 OR5BK1P-201ENST00000550421 823 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.1□□□□□ -1.11
CNGA1P29973 OR4C49P-201ENST00000563891 900 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.1□□□□□ -1.11
CNGA1P29973 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.1□□□□□ -1.11
CNGA1P29973 CR382285.1-202ENST00000604687 547 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AL359091.2-201ENST00000609303 556 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AL137000.1-201ENST00000610528 1244 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 MIR6503-201ENST00000622884 86 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 AL132796.3-201ENST00000624703 900 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC8.1□□□□□ -1.11
CNGA1P29973 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.1□□□□□ -1.11
CNGA1P29973 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
CNGA1P29973 AC068733.2-201ENST00000605434 1418 ntBASIC8.1□□□□□ -1.11
CNGA1P29973 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
CNGA1P29973 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.1□□□□□ -1.11
CNGA1P29973 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC8.1□□□□□ -1.11
CNGA1P29973 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.1□□□□□ -1.11
CNGA1P29973 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CNGA1P29973 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms