Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.85□□□□□ -1.15
COL4A5P29400 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.85□□□□□ -1.15
COL4A5P29400 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 RN7SKP23-201ENST00000625159 4301 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 Z99129.4-201ENST00000624649 2435 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
COL4A5P29400 U3.25-201ENST00000391209 220 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 RPS4XP14-201ENST00000493072 781 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.85□□□□□ -1.15
COL4A5P29400 Y_RNA.667-201ENST00000516212 107 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 AL591767.3-201ENST00000554632 525 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.85□□□□□ -1.15
COL4A5P29400 AC009237.12-201ENST00000604755 742 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 SNORA74.4-201ENST00000607595 199 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 AC120057.5-201ENST00000623840 154 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
COL4A5P29400 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.85□□□□□ -1.15
COL4A5P29400 SMG1P5-202ENST00000529428 4219 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 SMG1P2-201ENST00000566127 4221 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
COL4A5P29400 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 AC131392.2-201ENST00000505635 4332 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 OR7E122P-202ENST00000641144 6171 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 RNA5SP65-201ENST00000363166 119 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 RPL5P5-201ENST00000392009 893 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.84□□□□□ -1.15
COL4A5P29400 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.84□□□□□ -1.15
COL4A5P29400 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.84□□□□□ -1.15
COL4A5P29400 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.84□□□□□ -1.15
COL4A5P29400 RPL6P30-201ENST00000443382 862 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 AP000281.1-201ENST00000444036 316 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 RPL5P9-201ENST00000448118 886 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.84□□□□□ -1.15
COL4A5P29400 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.84□□□□□ -1.15
COL4A5P29400 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.84□□□□□ -1.15
COL4A5P29400 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 AC106785.4-201ENST00000569492 412 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.84□□□□□ -1.15
COL4A5P29400 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 AC034229.6-201ENST00000623704 224 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.84□□□□□ -1.15
COL4A5P29400 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
COL4A5P29400 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 AC008627.1-201ENST00000517511 1704 ntBASIC7.84□□□□□ -1.15
COL4A5P29400 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
COL4A5P29400 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL4A5P29400 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
COL4A5P29400 TATDN2P3-201ENST00000452855 3665 ntBASIC7.84□□□□□ -1.16
COL4A5P29400 MTCO1P28-201ENST00000574177 1528 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL4A5P29400 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
COL4A5P29400 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.83□□□□□ -1.16
COL4A5P29400 AL645936.1-201ENST00000441979 518 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 RPL31P15-201ENST00000449770 338 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 AC074386.1-201ENST00000476560 767 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 NATP-201ENST00000523491 878 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 AC092332.1-201ENST00000563684 829 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.83□□□□□ -1.16
COL4A5P29400 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.83□□□□□ -1.16
COL4A5P29400 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.83□□□□□ -1.16
COL4A5P29400 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.83□□□□□ -1.16
COL4A5P29400 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.83□□□□□ -1.16
COL4A5P29400 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms