Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 MRPL49P1-201ENST00000505951 535 ntBASIC6.52□□□□□ -1.37
CD40P25942 AC093752.1-206ENST00000511823 336 ntBASIC6.52□□□□□ -1.37
CD40P25942 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 RFPL4AP3-201ENST00000515267 345 ntBASIC6.52□□□□□ -1.37
CD40P25942 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.52□□□□□ -1.37
CD40P25942 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC6.52□□□□□ -1.37
CD40P25942 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.52□□□□□ -1.37
CD40P25942 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.52□□□□□ -1.37
CD40P25942 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.52□□□□□ -1.37
CD40P25942 AC013444.2-201ENST00000603317 787 ntBASIC6.52□□□□□ -1.37
CD40P25942 SUMO2P14-201ENST00000604488 293 ntBASIC6.52□□□□□ -1.37
CD40P25942 AC012640.3-201ENST00000607847 430 ntBASIC6.52□□□□□ -1.37
CD40P25942 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 AC116003.3-201ENST00000612669 541 ntBASIC6.52□□□□□ -1.37
CD40P25942 AL359513.1-201ENST00000614364 557 ntBASIC6.52□□□□□ -1.37
CD40P25942 AC243830.2-201ENST00000618067 630 ntBASIC6.52□□□□□ -1.37
CD40P25942 RN7SL680P-201ENST00000620379 299 ntBASIC6.52□□□□□ -1.37
CD40P25942 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.52□□□□□ -1.37
CD40P25942 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.52□□□□□ -1.37
CD40P25942 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.52□□□□□ -1.37
CD40P25942 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CD40P25942 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CD40P25942 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.52□□□□□ -1.37
CD40P25942 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CD40P25942 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.52□□□□□ -1.37
CD40P25942 AC009135.2-201ENST00000624136 1768 ntBASIC6.52□□□□□ -1.37
CD40P25942 THAP12P6-201ENST00000431978 2310 ntBASIC6.51□□□□□ -1.37
CD40P25942 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.51□□□□□ -1.37
CD40P25942 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD40P25942 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CD40P25942 RN7SKP63-201ENST00000363187 301 ntBASIC6.51□□□□□ -1.37
CD40P25942 RNU5B-1-201ENST00000363286 116 ntBASIC6.51□□□□□ -1.37
CD40P25942 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 OR13C3-201ENST00000374781 1108 ntBASIC6.51□□□□□ -1.37
CD40P25942 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 RN7SKP131-201ENST00000410698 301 ntBASIC6.51□□□□□ -1.37
CD40P25942 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 TAS2R2P-201ENST00000421146 910 ntBASIC6.51□□□□□ -1.37
CD40P25942 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.51□□□□□ -1.37
CD40P25942 DSTNP5-201ENST00000427921 523 ntBASIC6.51□□□□□ -1.37
CD40P25942 RPL5P2-201ENST00000429598 854 ntBASIC6.51□□□□□ -1.37
CD40P25942 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 VDAC2P3-201ENST00000430995 828 ntBASIC6.51□□□□□ -1.37
CD40P25942 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 CHCHD4P5-201ENST00000436684 427 ntBASIC6.51□□□□□ -1.37
CD40P25942 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 CR769776.1-201ENST00000441254 787 ntBASIC6.51□□□□□ -1.37
CD40P25942 GTF2F2P2-201ENST00000445825 721 ntBASIC6.51□□□□□ -1.37
CD40P25942 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 AL451074.4-201ENST00000447545 470 ntBASIC6.51□□□□□ -1.37
CD40P25942 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 CEACAMP3-202ENST00000483806 638 ntBASIC6.51□□□□□ -1.37
CD40P25942 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CD40P25942 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.51□□□□□ -1.37
CD40P25942 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.51□□□□□ -1.37
CD40P25942 RN7SKP242-201ENST00000515967 289 ntBASIC6.51□□□□□ -1.37
CD40P25942 IGKV3D-31-201ENST00000519131 281 ntBASIC6.51□□□□□ -1.37
CD40P25942 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.51□□□□□ -1.37
CD40P25942 AC087257.2-201ENST00000538759 928 ntBASIC6.51□□□□□ -1.37
CD40P25942 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.51□□□□□ -1.37
CD40P25942 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms