Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AP001160.4-201ENST00000596971 382 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 NIFKP6-201ENST00000598115 845 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC005393.1-201ENST00000617916 584 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AL645927.2-201ENST00000618350 349 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AC022079.1-201ENST00000621546 602 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 MIR6723-201ENST00000621981 89 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 AC126544.2-201ENST00000625174 749 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.23□□□□□ -1.25
COL6A2P12110 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
COL6A2P12110 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.23□□□□□ -1.25
COL6A2P12110 AC090771.1-201ENST00000585803 1618 ntBASIC7.23□□□□□ -1.25
COL6A2P12110 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL6A2P12110 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 AC009501.3-201ENST00000605001 1352 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL6A2P12110 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 RN7SKP36-201ENST00000363997 312 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 Y_RNA.209-201ENST00000364156 111 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 RNU1-16P-201ENST00000365477 164 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 HMGB3P1-201ENST00000393368 573 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 RPL36P18-201ENST00000419316 318 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC013268.2-201ENST00000420753 337 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 AL512661.1-201ENST00000434586 1253 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AL606752.1-201ENST00000435442 666 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 CLNS1AP1-201ENST00000435954 682 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AL731892.1-201ENST00000437364 1192 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 MTCYBP31-201ENST00000438855 1122 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 AL451074.4-201ENST00000447545 470 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 RN7SL423P-201ENST00000486202 304 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
COL6A2P12110 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC105313.1-201ENST00000509121 353 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 IGLV10-67-201ENST00000519446 325 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC012181.2-201ENST00000570210 699 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 MIR4793-201ENST00000577502 87 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC040904.1-201ENST00000590850 223 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC010463.3-201ENST00000594077 500 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 VN1R81P-201ENST00000602085 372 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 uc_338.33-201ENST00000614988 170 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 FAM74A6-203ENST00000615956 481 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC079298.2-201ENST00000623885 459 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.22□□□□□ -1.25
COL6A2P12110 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 AC183089.2-201ENST00000637931 916 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 BRD7P1-201ENST00000557705 1915 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 HSPD1P14-201ENST00000432666 1618 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 FBXL21-201ENST00000297158 1305 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL6A2P12110 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
COL6A2P12110 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.22□□□□□ -1.25
COL6A2P12110 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms