Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.42□□□□□ -1.22
UBE4BO95155 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.42□□□□□ -1.22
UBE4BO95155 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 AC023632.6-201ENST00000624338 2177 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
UBE4BO95155 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.41□□□□□ -1.22
UBE4BO95155 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 PFN1P11-201ENST00000445829 389 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 AL354872.1-201ENST00000456361 967 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 BCAS2P1-201ENST00000528022 632 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 SETP17-201ENST00000534163 817 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 MIR4312-201ENST00000579909 76 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.41□□□□□ -1.22
UBE4BO95155 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 AL359704.2-201ENST00000604335 521 ntBASIC7.41□□□□□ -1.22
UBE4BO95155 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
UBE4BO95155 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
UBE4BO95155 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
UBE4BO95155 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.41□□□□□ -1.22
UBE4BO95155 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE4BO95155 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
UBE4BO95155 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UBE4BO95155 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
UBE4BO95155 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
UBE4BO95155 RNA5SP429-201ENST00000363688 109 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 RNA5SP152-201ENST00000365184 110 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE4BO95155 MIR138-2-201ENST00000384916 84 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 UBBP1-201ENST00000392399 473 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
UBE4BO95155 AHCYP8-201ENST00000425108 209 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE4BO95155 HSPE1P27-201ENST00000430808 296 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC091849.1-201ENST00000509920 121 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.4□□□□□ -1.22
UBE4BO95155 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.4□□□□□ -1.22
UBE4BO95155 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE4BO95155 IGKV2D-38-201ENST00000518423 240 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.4□□□□□ -1.22
UBE4BO95155 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.4□□□□□ -1.22
UBE4BO95155 MIR6883-201ENST00000614952 78 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 AL445647.2-201ENST00000615170 130 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.4□□□□□ -1.22
UBE4BO95155 AC119674.1-217ENST00000641942 1086 ntBASIC7.4□□□□□ -1.22
UBE4BO95155 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.4□□□□□ -1.23
UBE4BO95155 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.4□□□□□ -1.23
UBE4BO95155 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
UBE4BO95155 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
UBE4BO95155 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
UBE4BO95155 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
UBE4BO95155 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
UBE4BO95155 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.39□□□□□ -1.23
UBE4BO95155 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
UBE4BO95155 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UBE4BO95155 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.39□□□□□ -1.23
UBE4BO95155 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
UBE4BO95155 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
UBE4BO95155 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms