Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AC018647.2-201ENST00000605778 4200 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AC016251.1-201ENST00000624299 4198 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 RPL9P21-201ENST00000392269 505 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 RPL23AP85-201ENST00000421838 433 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AL590762.4-201ENST00000425885 253 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 Z80107.2-201ENST00000445127 392 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AC007386.1-201ENST00000455212 582 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 CYCSP22-201ENST00000517555 339 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AP001823.1-201ENST00000604056 1003 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 AC007993.1-201ENST00000621298 2430 ntBASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC10.32□□□□□ -0.76
RIMBP3Q9UFD9 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 AL356967.1-201ENST00000406305 431 ntBASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 GAPDHP75-201ENST00000433910 943 ntBASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 AC023818.2-201ENST00000623817 2304 ntBASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC10.31□□□□□ -0.76
RIMBP3Q9UFD9 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AC138409.1-201ENST00000505001 3598 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 LINC02019-201ENST00000608605 2060 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AC087392.3-202ENST00000358446 1754 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 SNORA64.1-201ENST00000362600 132 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 MED28P4-201ENST00000433137 572 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AC091390.1-201ENST00000433904 331 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 BX510359.5-201ENST00000515651 304 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AL591767.3-201ENST00000554632 525 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 AL691477.1-201ENST00000624398 162 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 HCG18-244ENST00000602516 2890 ntBASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RIMBP3Q9UFD9 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 CYP4A44P-201ENST00000569984 154 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AP005119.1-201ENST00000580956 292 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 RNF138P2-201ENST00000603490 592 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC096708.4-201ENST00000620563 552 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 OR8G3P-202ENST00000641572 1255 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 AC016582.1-202ENST00000636341 2982 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 RPS2P45-201ENST00000469997 2057 ntBASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC10.29□□□□□ -0.76
RIMBP3Q9UFD9 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 331.6 ms