Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHD8Q9HCK8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 SAMM50P1-201ENST00000455403 1399 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC026774.2-201ENST00000513990 1098 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 THAP12P7-201ENST00000520248 2290 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 ST5-237ENST00000530991 3396 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC027575.3-201ENST00000583058 2747 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 FTX-215ENST00000638681 9771 ntTSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 RN7SKP271-201ENST00000410528 320 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC244452.1-201ENST00000413798 141 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 RPL35AP28-201ENST00000459730 331 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC114781.3-201ENST00000512083 142 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC100827.5-201ENST00000615883 426 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AC129778.1-202ENST00000623812 261 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AL591379.1-207ENST00000635982 261 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AL590763.1-201ENST00000398297 1545 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AL356317.1-201ENST00000396110 1436 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 HCG18-242ENST00000602319 3342 ntBASIC6.29□□□□□ -1.4
CHD8Q9HCK8 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHD8Q9HCK8 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AL353754.1-201ENST00000440219 340 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AP000435.1-201ENST00000528539 496 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 RN7SL706P-201ENST00000460079 292 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 GYG1P1-201ENST00000460864 698 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 RN7SL379P-201ENST00000479912 293 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 MIR1254-2-201ENST00000579553 63 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AL080317.3-201ENST00000607434 4315 ntBASIC6.28□□□□□ -1.4
CHD8Q9HCK8 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms