Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC123769.2-201ENST00000624332 5984 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 PSMC1P4-201ENST00000515236 1327 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 U3.52-201ENST00000384034 216 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AL663061.1-201ENST00000416625 580 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC236972.4-201ENST00000458091 963 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC022415.1-202ENST00000486612 523 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC139713.1-202ENST00000512366 460 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 PVT1-214ENST00000522875 922 ntTSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AP000662.1-201ENST00000530952 487 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC092375.1-201ENST00000550410 637 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC005519.1-201ENST00000554490 601 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 CHEK2P2-201ENST00000554701 672 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC004241.2-201ENST00000614562 444 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC9.68□□□□□ -0.86
SIN3AQ96ST3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SIN3AQ96ST3 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AC022613.3-201ENST00000560740 1346 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 MIR1266-201ENST00000408125 84 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AC093664.1-201ENST00000511779 289 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 HNRNPA3P9-201ENST00000604913 979 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AL138693.1-201ENST00000622219 129 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AC018692.2-201ENST00000624130 348 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AL035425.4-201ENST00000624509 1063 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 TEX41-255ENST00000626404 610 ntTSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 AC022819.1-201ENST00000563495 3910 ntBASIC9.67□□□□□ -0.86
SIN3AQ96ST3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.67□□□□□ -0.86
SIN3AQ96ST3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 MTCO1P25-201ENST00000414449 1799 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AC119674.1-204ENST00000641348 1343 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AL596268.1-201ENST00000427910 1048 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AKR1D1P1-201ENST00000457236 936 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AL390198.2-201ENST00000510553 222 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 OR9G2P-201ENST00000533326 880 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC9.66□□□□□ -0.86
SIN3AQ96ST3 NIFKP4-201ENST00000567275 1192 ntBASIC9.66□□□□□ -0.86
SIN3AQ96ST3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms