Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.81□□□□□ -1.16
CDK5RAP3Q96JB5 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CDK5RAP3Q96JB5 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 OR4G1P-202ENST00000641173 1788 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 RPL12P13-201ENST00000310055 497 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SKP47-201ENST00000365347 328 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC009362.1-201ENST00000427253 406 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC007365.2-201ENST00000428806 458 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 MYL6P3-201ENST00000436904 432 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC009518.3-201ENST00000438972 253 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC017099.1-201ENST00000448261 1028 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 OR52A4P-202ENST00000481634 799 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC107952.1-201ENST00000524200 376 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC025857.1-201ENST00000525252 377 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 NXPE2P1-201ENST00000543705 726 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC016144.1-201ENST00000548175 1087 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 GTF2IP6-201ENST00000583143 541 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC007347.2-201ENST00000623044 180 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC073263.3-201ENST00000624449 858 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 RPSAP68-201ENST00000625020 438 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 MIR665-201ENST00000635949 72 ntBASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.8□□□□□ -1.16
CDK5RAP3Q96JB5 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SKP117-201ENST00000410175 264 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SKP268-201ENST00000411107 316 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 OR52S1P-201ENST00000427016 937 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC018804.1-201ENST00000430381 618 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 SUMO2P8-201ENST00000434672 286 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 CEACAMP5-201ENST00000448037 961 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 CBX5P1-201ENST00000468470 561 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 RN7SL518P-201ENST00000491887 280 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 EIF4A3P1-201ENST00000578499 647 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC007255.2-201ENST00000604053 631 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 FXYD6P1-201ENST00000604857 285 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AL136370.1-201ENST00000608166 691 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC103564.3-201ENST00000621194 220 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC012629.3-201ENST00000623397 328 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC034229.6-201ENST00000623704 224 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC008626.2-201ENST00000624425 248 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC093909.6-201ENST00000624757 775 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 AC243725.1-201ENST00000637164 436 ntBASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDK5RAP3Q96JB5 OR2AH1P-202ENST00000641232 2744 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms