Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 OR5H3P-201ENST00000502817 919 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 MTCO1P31-201ENST00000506355 492 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 SNX18P25-201ENST00000510539 758 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 SNX18P27-201ENST00000523611 779 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 OR4A17P-201ENST00000526032 904 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AC005000.1-201ENST00000536192 288 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 GCSHP4-201ENST00000538792 439 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AC016839.1-201ENST00000578162 867 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AC005242.1-201ENST00000585658 438 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 CR382285.1-202ENST00000604687 547 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AL096803.3-201ENST00000609032 532 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AC016542.3-201ENST00000623520 619 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 MTND4P34-201ENST00000572715 1371 ntBASIC7.05□□□□□ -1.28
NUP43Q8NFH3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.05□□□□□ -1.28
NUP43Q8NFH3 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 RNU1-21P-201ENST00000363327 163 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SNORD116-9-201ENST00000384000 95 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SNORD116-3-201ENST00000384287 95 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SNORD116-7-201ENST00000384404 95 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SNORA68-201ENST00000384437 133 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SNORD116-5-201ENST00000384462 95 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SNRPEP5-201ENST00000425442 278 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 RPL6P24-201ENST00000445338 864 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 RPL4P2-201ENST00000447259 1282 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 RHEBP1-201ENST00000448647 556 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC010374.1-201ENST00000503762 1237 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC010306.1-201ENST00000523223 1117 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AP003717.3-201ENST00000544832 1180 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC022239.4-201ENST00000602626 504 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AC121247.2-201ENST00000604776 136 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 AP002782.1-201ENST00000623107 614 ntBASIC7.04□□□□□ -1.28
NUP43Q8NFH3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.04□□□□□ -1.28
NUP43Q8NFH3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms