Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 BX323845.2-201ENST00000458382 234 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SNORA35.1-201ENST00000458908 128 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 RN7SL145P-201ENST00000469955 296 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC021220.1-201ENST00000507445 630 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 OR5M6P-201ENST00000530227 937 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC007537.1-201ENST00000539347 327 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC092375.1-201ENST00000550410 637 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL135978.1-201ENST00000553618 1266 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SIGLEC31P-201ENST00000594237 551 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL031777.2-201ENST00000611953 196 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL352984.2-202ENST00000613699 155 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL161420.1-201ENST00000619393 264 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL355480.4-201ENST00000626823 69 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL354702.2-202ENST00000641481 890 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 BRD7P1-201ENST00000557705 1915 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 NEK2P4-201ENST00000425793 1329 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AL512310.3-201ENST00000547023 1335 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 AC090774.4-201ENST00000578888 1372 ntBASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CCDC50Q8IVM0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC093278.2-201ENST00000564956 2485 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 CHCHD3P1-201ENST00000425516 676 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC134879.1-201ENST00000426062 394 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 FRG2IP-201ENST00000563581 781 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 RN7SL42P-201ENST00000579786 294 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC012640.3-201ENST00000607847 430 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 FRG2MP-201ENST00000613317 856 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 pRNA.9-201ENST00000618609 89 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AP001885.1-201ENST00000621658 558 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 MIR6807-201ENST00000621968 92 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC120057.5-201ENST00000623840 154 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AL356585.10-201ENST00000641883 123 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 ZNF402P-201ENST00000404435 3100 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AC105114.1-201ENST00000624795 1862 ntBASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CCDC50Q8IVM0 AL049869.1-201ENST00000556933 1402 ntBASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 AC009135.2-201ENST00000624136 1768 ntBASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.18□□□□□ -1.26
CCDC50Q8IVM0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms