Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL451064.2-201ENST00000623514 1654 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RNA5SP65-201ENST00000363166 119 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RNA5SP176-201ENST00000390956 110 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 MICG-208ENST00000416822 132 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 OR52S1P-201ENST00000427016 937 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 FECHP1-201ENST00000431896 1214 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 OSTCP2-201ENST00000437956 444 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC009518.3-201ENST00000438972 253 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 SCDP1-201ENST00000455244 1081 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RPS16P9-201ENST00000477220 427 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RPL23AP80-201ENST00000495605 424 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RPL10P7-201ENST00000495649 625 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 MTCO3P42-201ENST00000509488 518 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RPL7L1P7-201ENST00000509986 724 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 MTCO3P39-201ENST00000514812 518 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 RNA5SP278-201ENST00000517055 102 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 IGKV1D-32-201ENST00000517449 318 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AP000662.1-201ENST00000530952 487 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC069240.2-201ENST00000550242 609 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 WDR45BP1-201ENST00000583470 1029 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC012511.1-201ENST00000608140 449 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AC017037.4-201ENST00000624526 826 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 AL139805.2-201ENST00000455305 2433 ntBASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
ZNF549Q6P9A3 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 RNA5SP302-201ENST00000364896 100 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 MIR99A-201ENST00000384906 81 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC006455.6-201ENST00000426192 893 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 ST13P21-201ENST00000453250 1098 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 SULT1D1P-201ENST00000458020 882 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AF305872.1-201ENST00000485217 471 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC021146.11-201ENST00000503319 491 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC140063.1-201ENST00000541343 259 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 TMF1P1-201ENST00000576058 373 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 MIR5095-201ENST00000578844 88 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AL158211.2-201ENST00000607282 395 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AP000577.1-201ENST00000624366 878 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 MIR665-201ENST00000635949 72 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AC243725.1-201ENST00000637164 436 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 AL354702.2-202ENST00000641481 890 ntBASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.72□□□□□ -1.33
ZNF549Q6P9A3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms