Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC7.94□□□□□ -1.14
RNF144AP50876 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
RNF144AP50876 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 AC125238.2-201ENST00000430003 1440 ntBASIC7.94□□□□□ -1.14
RNF144AP50876 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.94□□□□□ -1.14
RNF144AP50876 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RNF144AP50876 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF144AP50876 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC087392.3-202ENST00000358446 1754 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 Y_RNA.453-201ENST00000384223 109 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 Y_RNA.509-201ENST00000384506 99 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 MT-TL1-201ENST00000386347 75 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF144AP50876 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 AL079342.2-201ENST00000403367 482 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 RPS20P15-201ENST00000412792 311 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 RPS7P13-201ENST00000413955 498 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 FAF2P1-201ENST00000429974 1298 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 OR7A15P-201ENST00000449848 1009 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 RPL5P33-201ENST00000487833 905 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 AL358832.1-201ENST00000497800 389 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 NDUFA5P12-201ENST00000503796 343 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 Y_RNA.701-201ENST00000516812 110 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 snoZ278.1-201ENST00000517059 112 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 IGHV3-36-201ENST00000520848 401 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 GLTPP1-201ENST00000528859 622 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 BPTFP1-201ENST00000579209 492 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC7.93□□□□□ -1.14
RNF144AP50876 UBE2V2P2-201ENST00000587677 504 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AC005498.1-201ENST00000592125 465 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AC243960.5-201ENST00000597858 255 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.93□□□□□ -1.14
RNF144AP50876 RN7SKP290-201ENST00000606842 195 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AL021368.3-201ENST00000607119 578 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 RN7SL796P-201ENST00000613991 291 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AL121785.1-201ENST00000624745 708 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 VPS8-228ENST00000628962 207 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.93□□□□□ -1.14
RNF144AP50876 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RNF144AP50876 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 AP000705.2-201ENST00000433524 1386 ntBASIC7.93□□□□□ -1.14
RNF144AP50876 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
RNF144AP50876 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RNF144AP50876 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms