Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 PRELID1P3-201ENST00000450055 643 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC007000.1-201ENST00000453064 794 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AF186996.3-201ENST00000509527 964 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC114801.1-201ENST00000512633 297 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 IGLV1-62-201ENST00000518003 441 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC025171.4-201ENST00000607250 1047 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC068234.2-201ENST00000619646 522 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC012653.2-201ENST00000621880 420 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 uc_338.21-201ENST00000622458 147 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 KDM5DP1-201ENST00000622542 298 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 AC005785.2-201ENST00000624655 631 ntBASIC5.09□□□□□ -1.59
HLA-DQA1P01909 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HLA-DQA1P01909 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.09□□□□□ -1.6
HLA-DQA1P01909 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
HLA-DQA1P01909 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL391380.1-201ENST00000439300 1432 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC105749.1-201ENST00000631338 2008 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL512353.3-201ENST00000417517 1326 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC079753.1-201ENST00000623243 3868 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 U3.1-201ENST00000362500 215 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RN7SKP36-201ENST00000363997 312 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL109918.1-202ENST00000406724 436 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RN7SKP89-201ENST00000410774 242 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 VN1R33P-201ENST00000411800 887 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 TMA16P2-201ENST00000413187 601 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL139415.1-201ENST00000424862 352 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 GAPDHP69-201ENST00000425504 1008 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC073900.1-201ENST00000429766 776 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 SULT1D1P-201ENST00000458020 882 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RN7SL621P-201ENST00000472565 299 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RN7SL563P-201ENST00000481233 298 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC117392.1-201ENST00000487061 596 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC114300.1-201ENST00000502347 280 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AP006587.5-201ENST00000532033 739 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 CRADD-210ENST00000552033 622 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC092133.1-201ENST00000565828 719 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC004852.1-201ENST00000605206 154 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL049541.2-201ENST00000626377 555 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 GAS2-210ENST00000630668 674 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 AL731532.1-201ENST00000623972 4236 ntBASIC5.08□□□□□ -1.6
HLA-DQA1P01909 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HLA-DQA1P01909 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AL592429.1-201ENST00000403909 1473 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 AC005332.9-201ENST00000620266 2921 ntBASIC5.07□□□□□ -1.6
HLA-DQA1P01909 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DQA1P01909 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms