Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN2BO60939 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN2BO60939 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.45□□□□□ -1.38
SCN2BO60939 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN2BO60939 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC020658.2-201ENST00000559030 4020 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN2BO60939 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN2BO60939 PWRN1-212ENST00000569908 1435 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SCN2BO60939 RNA5SP512-201ENST00000364550 120 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SCN2BO60939 NPM1P31-201ENST00000399021 764 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.44□□□□□ -1.38
SCN2BO60939 CLIC4P3-201ENST00000422221 752 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 AL354714.5-201ENST00000450131 590 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 RN7SL149P-201ENST00000465197 281 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 RN7SL187P-201ENST00000495587 303 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 FTH1P8-201ENST00000498161 514 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
SCN2BO60939 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC011611.6-201ENST00000547483 255 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC024614.1-201ENST00000577546 307 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 MIR1273F-201ENST00000580581 99 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 OR7A11P-201ENST00000597719 953 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 AC024451.4-201ENST00000602578 752 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 AC010333.3-201ENST00000615100 402 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 SNX18P10-201ENST00000625014 519 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 FKBP1AP4-201ENST00000631775 336 ntBASIC6.44□□□□□ -1.38
SCN2BO60939 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN2BO60939 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SCN2BO60939 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN2BO60939 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN2BO60939 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN2BO60939 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN2BO60939 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
SCN2BO60939 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SCN2BO60939 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 AC093829.1-201ENST00000506662 1618 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 AL359694.2-201ENST00000567753 1615 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
SCN2BO60939 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.43□□□□□ -1.38
SCN2BO60939 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 AL391261.1-201ENST00000555712 1479 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN2BO60939 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SCN2BO60939 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 RNA5SP65-201ENST00000363166 119 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN2BO60939 RNA5SP53-201ENST00000391299 120 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 SLC25A5P7-201ENST00000406156 896 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 CLCN3P1-201ENST00000423965 1017 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.43□□□□□ -1.38
SCN2BO60939 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 AC007365.2-201ENST00000428806 458 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN2BO60939 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.43□□□□□ -1.38
SCN2BO60939 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.43□□□□□ -1.38
SCN2BO60939 CT45A11P-201ENST00000448043 1134 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 AC092421.1-201ENST00000448148 418 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 GOT2P2-201ENST00000450663 1251 ntBASIC6.43□□□□□ -1.38
SCN2BO60939 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN2BO60939 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms