Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 AP003175.1-201ENST00000641383 6658 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
ZIC3O60481 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 RPSAP60-201ENST00000415403 880 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 PSMC1P2-201ENST00000423961 1204 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC000089.1-201ENST00000424559 801 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.19□□□□□ -1.42
ZIC3O60481 E2F6P3-201ENST00000441743 743 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.19□□□□□ -1.42
ZIC3O60481 RPL23AP28-201ENST00000448062 470 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.19□□□□□ -1.42
ZIC3O60481 AC063955.1-201ENST00000462872 685 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 RN7SL790P-201ENST00000474043 298 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 RN7SL654P-201ENST00000479178 292 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC026826.1-201ENST00000493002 361 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC021220.1-201ENST00000507445 630 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 SNX18P23-201ENST00000510867 677 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC093878.1-201ENST00000515630 432 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 RNA5SP318-201ENST00000516352 92 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC087360.1-201ENST00000518788 616 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.19□□□□□ -1.42
ZIC3O60481 AP003168.1-201ENST00000530091 307 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.19□□□□□ -1.42
ZIC3O60481 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.19□□□□□ -1.42
ZIC3O60481 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 AC068408.1-201ENST00000577406 1144 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 IGLJCOR18-201ENST00000584002 424 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 AL590032.1-201ENST00000604920 252 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 AL118508.4-201ENST00000624142 1176 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC005858.3-201ENST00000624756 589 ntBASIC6.19□□□□□ -1.42
ZIC3O60481 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.19□□□□□ -1.42
ZIC3O60481 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.19□□□□□ -1.42
ZIC3O60481 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZIC3O60481 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.18□□□□□ -1.42
ZIC3O60481 ENO1P4-201ENST00000416471 1785 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ZIC3O60481 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.18□□□□□ -1.42
ZIC3O60481 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 AC009237.3-203ENST00000442128 3551 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ZIC3O60481 RNA5SP382-201ENST00000363355 112 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 AC092634.1-201ENST00000366505 199 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.18□□□□□ -1.42
ZIC3O60481 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZIC3O60481 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.18□□□□□ -1.42
ZIC3O60481 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.18□□□□□ -1.42
ZIC3O60481 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 AC021146.11-201ENST00000503319 491 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ZIC3O60481 IGKV2D-38-201ENST00000518423 240 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 AC131935.1-201ENST00000524621 333 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 AC110056.1-201ENST00000525759 911 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 SETP17-201ENST00000534163 817 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 RPL41P2-201ENST00000544920 409 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.18□□□□□ -1.42
ZIC3O60481 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.18□□□□□ -1.42
ZIC3O60481 RPS4XP21-201ENST00000603814 750 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 BNIP3P7-201ENST00000605641 516 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.18□□□□□ -1.42
ZIC3O60481 AL354696.1-201ENST00000614652 497 ntBASIC6.18□□□□□ -1.42
ZIC3O60481 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.18□□□□□ -1.42
ZIC3O60481 PRNCR1-201ENST00000635449 12727 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms