Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PSMA6P2-201ENST00000457574 686 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AC137549.1-201ENST00000514243 533 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 OR7E154P-201ENST00000525174 932 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AC005858.3-201ENST00000624756 589 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AL596275.2-203ENST00000641951 371 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 BRD7P6-201ENST00000431406 1860 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AL021877.2-201ENST00000624442 10684 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC013268.3-201ENST00000262716 2324 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 OR10D1P-201ENST00000355343 936 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 RN7SKP191-201ENST00000364713 306 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 RN7SKP130-201ENST00000364924 301 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 RPL31P11-202ENST00000454082 372 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC009567.2-201ENST00000502989 349 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC095057.1-201ENST00000507583 168 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC096754.1-201ENST00000508904 818 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC106800.2-201ENST00000514009 1103 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AP005902.2-201ENST00000518393 307 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 IGKV2D-38-201ENST00000518423 240 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC023827.2-201ENST00000566880 1061 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AC025287.2-201ENST00000621911 668 ntBASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP2Q9UDT6 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 GMFG-201ENST00000253054 616 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC000089.1-201ENST00000424559 801 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AP003385.1-201ENST00000426387 893 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 WDR82P2-201ENST00000444540 928 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 CEACAMP11-201ENST00000455211 583 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC096743.1-201ENST00000485172 319 ntBASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.12□□□□□ -1.11
CLIP2Q9UDT6 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms