Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AL139135.1-201ENST00000412675 209 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 MICG-208ENST00000416822 132 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 RPL36P18-201ENST00000419316 318 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 SNRPEP5-201ENST00000425442 278 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AL135933.1-201ENST00000498657 802 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 RPL7L1P7-201ENST00000509986 724 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 RNA5SP75-201ENST00000516841 111 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 SSU72P6-201ENST00000532644 488 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 MIR4800-201ENST00000537353 80 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC011611.6-201ENST00000547483 255 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC026458.1-201ENST00000564330 438 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 MIR665-201ENST00000635949 72 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC008957.3-201ENST00000624112 2242 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 AC093844.1-201ENST00000514910 1361 ntBASIC7.05□□□□□ -1.28
PCDH9Q9HC56 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PCDH9Q9HC56 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 RNA5SP35-201ENST00000391257 129 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 PDCL3P5-201ENST00000398028 722 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AL117344.1-201ENST00000407196 616 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 MTND1P10-201ENST00000426108 832 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AL158214.1-201ENST00000444423 404 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 RN7SL379P-201ENST00000479912 293 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 RN7SL382P-201ENST00000482631 282 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 RN7SL561P-201ENST00000488553 281 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 RN7SL143P-201ENST00000496780 297 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC098799.1-201ENST00000504752 800 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 RN7SKP11-201ENST00000517018 287 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 SIGLEC31P-201ENST00000594237 551 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC099777.1-201ENST00000603779 1070 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AL359704.2-201ENST00000604335 521 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC009283.1-201ENST00000615852 645 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC025287.2-201ENST00000621911 668 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC008626.2-201ENST00000624425 248 ntBASIC7.04□□□□□ -1.28
PCDH9Q9HC56 AC073263.3-201ENST00000624449 858 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms