Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC090971.3-201ENST00000557871 1041 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC020914.7-201ENST00000594477 545 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC004908.1-201ENST00000606572 541 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 RN7SL126P-201ENST00000616400 299 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC005393.1-201ENST00000617916 584 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC004836.1-201ENST00000623032 634 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 MTCO1P25-201ENST00000414449 1799 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 AC006511.3-201ENST00000624929 1783 ntBASIC8.25□□□□□ -1.09
UPF2Q9HAU5 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
UPF2Q9HAU5 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 TMCC1P1-201ENST00000518897 1980 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AC020658.2-201ENST00000559030 4020 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RN7SKP118-201ENST00000364331 330 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RN7SKP55-201ENST00000364888 307 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AP003170.5-201ENST00000397185 335 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 CYCSP17-201ENST00000407870 315 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RPSAP59-201ENST00000421048 890 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 GAPDHP55-201ENST00000423136 803 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RPLP0P1-201ENST00000457002 361 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AC016489.1-201ENST00000461109 375 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RN7SL263P-201ENST00000467969 290 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RNA5SP518-201ENST00000515957 119 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 RN7SL664P-201ENST00000584239 305 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AC133485.6-201ENST00000624045 688 ntBASIC8.24□□□□□ -1.09
UPF2Q9HAU5 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
UPF2Q9HAU5 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 PPIAP26-201ENST00000377951 522 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 MIR614-201ENST00000385082 90 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 SLC25A5P7-201ENST00000406156 896 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC239367.3-201ENST00000428996 814 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 BMP6P1-201ENST00000431230 679 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 CTSLP2-201ENST00000580501 394 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC061975.3-201ENST00000583209 244 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC012065.3-201ENST00000602736 439 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC007262.1-201ENST00000604099 321 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 RN7SL820P-201ENST00000616437 299 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AL589935.2-201ENST00000616471 1231 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 TCL6_3.1-201ENST00000619064 137 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 AC012254.5-201ENST00000623573 478 ntBASIC8.23□□□□□ -1.09
UPF2Q9HAU5 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
UPF2Q9HAU5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 OR11H13P-201ENST00000359695 979 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 AC092066.1-201ENST00000425131 317 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.22□□□□□ -1.09
UPF2Q9HAU5 AF274573.1-201ENST00000430535 494 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 AL355355.1-201ENST00000442900 793 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 HIST1H2APS6-201ENST00000448609 364 ntBASIC8.22□□□□□ -1.09
UPF2Q9HAU5 MGAT2P1-201ENST00000449718 797 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms