Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM2Q9C040 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TRIM2Q9C040 AL022323.4-201ENST00000623980 13120 ntBASIC6.54□□□□□ -1.36
TRIM2Q9C040 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM2Q9C040 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM2Q9C040 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC005261.2-201ENST00000593427 4258 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 QRSL1P3-201ENST00000552666 1316 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 CCDC150P1-201ENST00000537123 2215 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC034111.1-201ENST00000562143 3770 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC013410.2-201ENST00000422627 201 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 DUTP4-201ENST00000424782 475 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 FDPSP6-201ENST00000425091 512 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 HMGN1P6-201ENST00000438508 291 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 RPS19P6-201ENST00000441327 433 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC008620.1-201ENST00000468453 592 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC016559.1-201ENST00000511420 199 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC135626.1-201ENST00000556983 435 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 UBE2CP4-201ENST00000561405 535 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 RN7SL689P-201ENST00000577215 297 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 RN7SL778P-201ENST00000607160 297 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC027271.1-201ENST00000610270 610 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 uc_338.37-201ENST00000620113 186 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AP002371.2-201ENST00000624450 503 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC004808.2-201ENST00000627965 773 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 NCOA4P3-201ENST00000513203 1877 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 MRPS17P1-201ENST00000596009 3130 ntBASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM2Q9C040 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
TRIM2Q9C040 AC104837.1-201ENST00000444644 1587 ntBASIC6.52□□□□□ -1.36
TRIM2Q9C040 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.52□□□□□ -1.36
TRIM2Q9C040 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 AL121949.2-201ENST00000403446 1548 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 RN7SKP107-201ENST00000364157 290 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 MIR431-201ENST00000385266 114 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 NPM1P38-201ENST00000403835 865 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC105052.2-201ENST00000434317 794 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC114878.1-201ENST00000441166 358 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC093799.1-201ENST00000452411 499 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM2Q9C040 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.52□□□□□ -1.37
TRIM2Q9C040 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM2Q9C040 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms